RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 KLF11O14901 512 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 TLR5O60602 858 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 TGDSO95455 350 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 GABRB3P28472 473 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ACVRL1P37023 503 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 SERPINB8P50452 374 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ARTNQ5T4W7 220 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 RINLQ6ZS11 566 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 SCML4Q8N228 414 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 FAM13CQ8NE31 585 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ZNF398Q8TD17 642 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.4
CIITA-212ENST00000618207 DEFB118Q96PH6 123 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 TSGA13Q96PP4 275 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 FCRL5Q96RD9 977 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 NDNQ99608 321 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ZYG11BQ9C0D3 744 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 MKS1Q9NXB0 559 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 G3BP2Q9UN86 482 aaKnown RBP12.58□□□□□ -0.4
CIITA-212ENST00000618207 MYO7AQ13402 2215 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ANKRD12Q6UB98 2062 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 GYG2O15488 501 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ENTPD5O75356 428 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 OR1E1P30953 314 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 SKIV2L2P42285 1042 aaKnown RBP12.58□□□□□ -0.4
CIITA-212ENST00000618207 ZNF135P52742 658 aaPredicted RBP12.58□□□□□ -0.4
CIITA-212ENST00000618207 ACCSLQ4AC99 568 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 PCID2Q5JVF3 399 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 MARC1Q5VT66 337 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ZNF470Q6ECI4 717 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 PKN3Q6P5Z2 889 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 LZTR1Q8N653 840 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 ACMSDQ8TDX5 336 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 KCTD4Q8WVF5 259 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 APBB2Q92870 758 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 SLC39A13Q96H72 371 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 NSL1Q96IY1 281 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 C8orf48Q96LL4 319 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 RAB3IPQ96QF0 476 aaPredicted RBP12.58□□□□□ -0.4
CIITA-212ENST00000618207 OMDQ99983 421 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 TLR8Q9NR97 1041 aaKnown RBP12.58□□□□□ -0.4
CIITA-212ENST00000618207 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
CIITA-212ENST00000618207 TLK1Q9UKI8 766 aa12.58□□□□□ -0.4
CIITA-212ENST00000618207 SYN3O14994 580 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 SNNO75324 88 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 VNN2O95498 520 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 SLC4A1P02730 911 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 GALTP07902 379 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 RPSAP08865 295 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 PTPN4P29074 926 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 OR1D2P34982 312 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 RASSF2P50749 326 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 GEMP55040 296 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 IHHQ14623 411 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PTPRCAPQ14761 206 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ZNF789Q5FWF6 425 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 NAPRTQ6XQN6 538 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PTAR1Q7Z6K3 402 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 WDR75Q8IWA0 830 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PPHLN1Q8NEY8 458 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 TTC8Q8TAM2 541 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PIWIL2Q8TC59 973 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 HHIPL1Q96JK4 782 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 GREB1Q4ZG55 1949 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 OR51F1A6NGY5 319 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PRR5-ARHGAP8B1AHC4 643 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 BIRC5O15392 142 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ATP5HO75947 161 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 IRF1P10914 325 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 MXRA7P84157 204 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ARHGAP8P85298 464 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 THOC5Q13769 683 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 SPOUT1Q5T280 376 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 TIGD7Q6NT04 549 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 ZC3HC1Q86WB0 502 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 ATP6V0D2Q8N8Y2 350 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 BHMTQ93088 406 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 MCUR1Q96AQ8 359 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 EXOC2Q96KP1 924 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 CADM1Q9BY67 442 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 NMRAL1Q9HBL8 299 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 RUVBL2Q9Y230 463 aaKnown RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 KCTD3Q9Y597 815 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 A0A0D9SEW6 157 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.57□□□□□ -0.4
CIITA-212ENST00000618207 TMEM189-UBE2V1I3L0A0 370 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 INPPL1O15357 1258 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 GM2AP17900 193 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 ARNTP27540 789 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 HOXC13P31276 330 aa12.57□□□□□ -0.4
CIITA-212ENST00000618207 SLC1A2P43004 574 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms