RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZBTB17Q13105 803 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 BYSLQ13895 437 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 STARD3Q14849 445 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 CARD16Q5EG05 197 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 ATXN7L2Q5T6C5 722 aaPredicted RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 C9orf64Q5T6V5 341 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 HEATR6Q6AI08 1181 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 KIAA1211LQ6NV74 962 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 TMEM92Q6UXU6 159 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 SYT13Q7L8C5 426 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 STK40Q8N2I9 435 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 RYBPQ8N488 228 aaPredicted RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 TSEN2Q8NCE0 465 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 KIF18AQ8NI77 898 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 NKD2Q969F2 451 aaPredicted RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 EXOC2Q96KP1 924 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 IL12RB2Q99665 862 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 CEP41Q9BYV8 373 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 USP29Q9HBJ7 922 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 HOMER3Q9NSC5 361 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 LHX3Q9UBR4 397 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 RNF14Q9UBS8 474 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 CHD5Q8TDI0 1954 aa15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 MYO18AQ92614 2054 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-204ENST00000617222 MUSKO15146 869 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 KCNN4O15554 427 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 MTSS1O43312 755 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF500O60304 480 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 GSRP00390 522 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 RGRP47804 291 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 KCNJ1P48048 391 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 MAXP61244 160 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 ITKQ08881 620 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 WASHC5Q12768 1159 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 CAMK2GQ13555 558 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 CRY1Q16526 586 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 TEX44Q53QW1 395 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 DPY19L3Q6ZPD9 716 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 PLPP6Q8IY26 295 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 PGBD5Q8N414 524 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 CNTD1Q8N815 330 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 TMEM105Q8N8V8 129 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 FAM71DQ8N9W8 422 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 CHST14Q8NCH0 376 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 OR2A12Q8NGT7 310 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 MAGOHBQ96A72 148 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF419Q96HQ0 510 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 PSKH2Q96QS6 385 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 FERMT1Q9BQL6 677 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 TMEM121Q9BTD3 319 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 IER2Q9BTL4 223 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 C11orf16Q9NQ32 467 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 SPATA6Q9NWH7 488 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 CDC23Q9UJX2 597 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF148Q9UQR1 794 aa15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 FARP1Q9Y4F1 1045 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 NYNRINQ9P2P1 1898 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-204ENST00000617222 GOLGA6L10A0A0M3HER8 536 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 TTC24A2A3L6 582 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 RNF103O00237 685 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 IGSF6O95976 241 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 HLA-DQB2P05538 268 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 HSPA9P38646 679 aaKnown RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 CXCL12P48061 93 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 SCNN1BP51168 640 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 NRLP54845 237 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 SATB1Q01826 763 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 NSUN2Q08J23 767 aaKnown RBP eCLIP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 OASLQ15646 514 aaKnown RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 MYLK3Q32MK0 819 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 DRICH1Q6PGQ1 229 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 SRLQ86TD4 932 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 OR2AP1Q8NGE2 309 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 OR6K2Q8NGY2 324 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 CCDC114Q96M63 670 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 GDAP1L1Q96MZ0 367 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 AGAP3Q96P47 875 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 FAM129BQ96TA1 746 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 POLMQ9NP87 494 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 EVLQ9UI08 416 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 DRG1Q9Y295 367 aaKnown RBP15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 TTLL3Q9Y4R7 772 aa15.85■□□□□ 0.13
PCDHGC3-204ENST00000617222 TCRBV21S2A2A0A5A6 115 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 CFAP69A5D8W1 941 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 INSIG1O15503 277 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZBTB24O43167 697 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 GJB3O75712 270 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 POP4O95707 220 aaKnown RBP15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 AVPR2P30518 371 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 STIP1P31948 543 aaKnown RBP15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 GKP32189 559 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 CHRNA3P32297 505 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 CCNHP51946 323 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 DGKEP52429 567 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 CYP1B1Q16678 543 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 MAMSTRQ6ZN01 415 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 PID1Q7Z2X4 250 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 ZNF567Q8N184 647 aa15.84■□□□□ 0.13
PCDHGC3-204ENST00000617222 OR2T3Q8NH03 318 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms