RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	ARHGAP36	Q6ZRI8	547 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	SYCE1	Q8N0S2	351 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	AADAT	Q8N5Z0	425 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	RUBCN	Q92622	972 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	GDAP1L1	Q96MZ0	367 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	ZNF599	Q96NL3	588 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	OMD	Q99983	421 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	HEPH	Q9BQS7	1158 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	BTBD1	Q9H0C5	482 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	PCED1A	Q9H1Q7	454 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	SGK2	Q9HBY8	427 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	LHX3	Q9UBR4	397 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	SARDH	Q9UL12	918 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	PCDHGA5	Q9Y5G8	931 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	WASF2	Q9Y6W5	498 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	PI4KA	P42356	2102 aa		18.7	■□□□□ 0.58
CADM1-222	ENST00000616271	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	CCDC175	P0C221	793 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	CTNNA2	P26232	953 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	DRD3	P35462	400 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	MARCKSL1	P49006	195 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	GALNT2	Q10471	571 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	CYTH1	Q15438	398 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	TAZ	Q16635	292 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	TMCO4	Q5TGY1	634 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	SLC9A4	Q6AI14	798 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	MFSD7	Q6UXD7	560 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	FAM124A	Q86V42	546 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	TMEFF1	Q8IYR6	380 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	HDDC3	Q8N4P3	179 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	RNF10	Q8N5U6	811 aa	Known RBP	18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	GANC	Q8TET4	914 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	FAM131C	Q96AQ9	280 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	RNF25	Q96BH1	459 aa	Predicted RBP	18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	PPP1R16A	Q96I34	528 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	RBM41	Q96IZ5	413 aa	Known RBP	18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	LRIG1	Q96JA1	1093 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	GPR174	Q9BXC1	333 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	MAK16	Q9BXY0	300 aa	Known RBP	18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	SERGEF	Q9UGK8	458 aa		18.69	■□□□□ 0.58
CADM1-222	ENST00000616271	CCDC66	A2RUB6	948 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	APOL1	O14791	398 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	SLC7A4	O43246	635 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	MAFK	O60675	156 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	LEFTY1	O75610	366 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	PALM	O75781	387 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	RNASEH2A	O75792	299 aa	Known RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	ZFX	P17010	805 aa	Predicted RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	ACSL1	P33121	698 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	GARS	P41250	739 aa	Known RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	CDKN2B	P42772	138 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	DHPS	P49366	369 aa	Predicted RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	GSE1	Q14687	1217 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	SPOCD1	Q6ZMY3	1216 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	ZNF662	Q6ZS27	426 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	NT5DC3	Q86UY8	548 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	RYBP	Q8N488	228 aa	Predicted RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	PLD5	Q8N7P1	536 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	CADM4	Q8NFZ8	388 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	EXD1	Q8NHP7	514 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	GRIN3A	Q8TCU5	1115 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	KRT35	Q92764	455 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	FOXJ1	Q92949	421 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	PDLIM2	Q96JY6	352 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	CINP	Q9BW66	212 aa	Predicted RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	ZDHHC6	Q9H6R6	413 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	PCDHA3	Q9Y5H8	950 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	PLXNA2	O75051	1894 aa		18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	TP53BP1	Q12888	1972 aa	Predicted RBP	18.68	■□□□□ 0.58
CADM1-222	ENST00000616271	FAM186A	A6NE01	2351 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	GPR179	Q6PRD1	2367 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	KPNA3	O00505	521 aa	Predicted RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	LRP3	O75074	770 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	POP4	O95707	220 aa	Known RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	SEMA4F	O95754	770 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	MX2	P20592	715 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	DPP6	P42658	865 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	METAP1	P53582	386 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	GBE1	Q04446	702 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	RAD51	Q06609	339 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	ZNF33A	Q06730	810 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	LBR	Q14739	615 aa	Known RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	MYLK3	Q32MK0	819 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	ARSI	Q5FYB1	569 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	TFDP3	Q5H9I0	405 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	LYSMD4	Q5XG99	296 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	TIGD7	Q6NT04	549 aa	Predicted RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	CYP2U1	Q7Z449	544 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	RFX6	Q8HWS3	928 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	SLC41A1	Q8IVJ1	513 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	RCOR2	Q8IZ40	523 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	NSMCE1	Q8WV22	266 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	HSPA12B	Q96MM6	686 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	ZNF830	Q96NB3	372 aa	Predicted RBP	18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	HINFP	Q9BQA5	517 aa		18.67	■□□□□ 0.58
CADM1-222	ENST00000616271	OSBPL1A	Q9BXW6	950 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms