RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PHF13Q86YI8 300 aaPredicted RBP17.62■□□□□ 0.41
HMGXB3-206ENST00000613459 EPS8L1Q8TE68 723 aa17.62■□□□□ 0.41
HMGXB3-206ENST00000613459 PYDC1Q8WXC3 89 aa17.62■□□□□ 0.41
HMGXB3-206ENST00000613459 FAIM2Q9BWQ8 316 aa17.62■□□□□ 0.41
HMGXB3-206ENST00000613459 PTGES3LE9PB15 166 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 WFS1O76024 890 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ZNF24P17028 368 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ADSSP30520 456 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 RPA3P35244 121 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 PSEN2P49810 448 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 AAGABQ6PD74 315 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 KBTBD8Q8NFY9 601 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 TNFSF13BQ9Y275 285 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 TECPR2O15040 1411 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 CYP3A7-CYP3A51PA0A087WV96 503 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 CABYRO75952 493 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ENDOD1O94919 500 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ZNF286BP0CG31 522 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 CYP3A7P24462 503 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 AGLP35573 1532 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 GTF2BQ00403 316 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ZNF549Q6P9A3 640 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 OR7A2PQ8NGA2 310 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 C2orf49Q9BVC5 232 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 RACGAP1Q9H0H5 632 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 C3orf18Q9UK00 162 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ANGPT4Q9Y264 503 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 TTPAP49638 278 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 NR1D2Q14995 579 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ACOX1Q15067 660 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 TCEA2Q15560 299 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 PDK4Q16654 411 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 PPP1R15BQ5SWA1 713 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 TFAP2DQ7Z6R9 452 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 AGAP11Q8TF27 550 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 HDAC7Q8WUI4 952 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ART4Q93070 314 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 MRPL57Q9BQC6 102 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 E5RJQ4 531 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 MRPS22P82650 360 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ZNF621Q6ZSS3 439 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 C1orf186Q6ZWK4 172 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 AMER2Q8N7J2 671 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 POMGNT2Q8NAT1 580 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 CHST7Q9NS84 486 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ARL15Q9NXU5 204 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ZNF232Q9UNY5 417 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 ZSCAN5CA6NGD5 496 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 AMHP03971 560 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 MAMLD1Q13495 774 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 IRAK1BP1Q5VVH5 260 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 DHDDSQ86SQ9 333 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 DNAJB3Q8WWF6 145 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 CERS2Q96G23 380 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 SPAG4Q9NPE6 437 aa17.61■□□□□ 0.41
HMGXB3-206ENST00000613459 MAGEC1O60732 1142 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 FMO4P31512 558 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 RPL5P46777 297 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 CCT3P49368 545 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 TSEN2Q8NCE0 465 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 QKIQ96PU8 341 aaKnown RBP eCLIP17.6■□□□□ 0.413e-38■■■■■ 83.5
HMGXB3-206ENST00000613459 DGCR6LQ9BY27 220 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 PRPF19Q9UMS4 504 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 ATP6V0D1P61421 351 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 NDUFAF6Q330K2 333 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 MFHAS1Q9Y4C4 1052 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 ATXN2Q99700 1313 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 CCDC182A6NF36 153 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 PPIBP23284 216 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 TLX1P31314 330 aaPredicted RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 PTDSS1P48651 473 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 PSMD4P55036 377 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 FAM171A1Q5VUB5 890 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 EIF3MQ7L2H7 374 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 ADGRA1Q86SQ6 560 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 DENND6AQ8IWF6 608 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 SCUBE3Q8IX30 993 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 KIFC1Q9BW19 673 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 MRIQ9BWK5 157 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 CCNB1IP1Q9NPC3 277 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 CLN6Q9NWW5 311 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 CHKBQ9Y259 395 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 RAP2CQ9Y3L5 183 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 RGSL1A5PLK6 1076 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 EPHX2P34913 555 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 LY6KQ17RY6 165 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 FAM71AQ8IYT1 594 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 FBXW8Q8N3Y1 598 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 KCNMB3Q9NPA1 279 aa17.6■□□□□ 0.41
HMGXB3-206ENST00000613459 ANKDD1BA6NHY2 528 aa17.59■□□□□ 0.41
HMGXB3-206ENST00000613459 TRUB2O95900 331 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-206ENST00000613459 MT-CO1P00395 513 aa17.59■□□□□ 0.41
HMGXB3-206ENST00000613459 SPIDRQ14159 915 aa17.59■□□□□ 0.41
HMGXB3-206ENST00000613459 TAF5Q15542 800 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms