RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ZCCHC23Q6ZST2 131 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 TMC7Q7Z402 723 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 ZBTB8BQ8NAP8 495 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 GSDMBQ8TAX9 411 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 LRRC39Q96DD0 335 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 PGAP3Q96FM1 320 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 GPAMQ9HCL2 828 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 UBAP1Q9NZ09 502 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 DNAJB4Q9UDY4 337 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 SFMBT1Q9UHJ3 866 aa16.76■□□□□ 0.27
CNOT3-208ENST00000613073 PAIP2BQ9ULR5 123 aaKnown RBP16.76■□□□□ 0.27
CNOT3-208ENST00000613073 TGDSO95455 350 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 F9P00740 461 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 VARSP26640 1264 aaKnown RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 ETV4P43268 484 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 CXCR3P49682 368 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SLC5A3P53794 718 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 CCNIQ14094 377 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SLC39A12Q504Y0 691 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SLC44A4Q53GD3 710 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 MROH9Q5TGP6 573 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 TTC39BQ5VTQ0 682 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 CES4AQ5XG92 561 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 CES3Q6UWW8 571 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 LINC01599Q8WXQ3 324 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 PRPF18Q99633 342 aaKnown RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 MRPL1Q9BYD6 325 aaKnown RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SLC13A1Q9BZW2 595 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 ZDHHC7Q9NXF8 308 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 ABI2Q9NYB9 513 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 TRDMT1O14717 391 aaKnown RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 MSI1O43347 362 aaKnown RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SSU72Q9NP77 194 aaKnown RBP16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SH3GLB1Q9Y371 365 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 PCDHA11Q9Y5I1 949 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 SHROOM3Q8TF72 1996 aa16.75■□□□□ 0.27
CNOT3-208ENST00000613073 AIF1P55008 147 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 ITGA9Q13797 1035 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 CHI3L2Q15782 390 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 SLC24A5Q71RS6 500 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 LZICQ8WZA0 190 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 UROC1Q96N76 676 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 SOX13Q9UN79 622 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 THSD7BQ9C0I4 1608 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 H3BSA7 217 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 ZMPSTE24O75844 475 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 KRT37O76014 449 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 PTPN3P26045 913 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 SLC5A2P31639 672 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 CCR3P51677 355 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 SH2D5Q6ZV89 423 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 PDZD4Q76G19 769 aaPredicted RBP16.74■□□□□ 0.27
CNOT3-208ENST00000613073 RIN3Q8TB24 985 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 ALKBH8Q96BT7 664 aaKnown RBP16.74■□□□□ 0.27
CNOT3-208ENST00000613073 CASP8AP2Q9UKL3 1982 aa16.74■□□□□ 0.27
CNOT3-208ENST00000613073 SF3B1O75533 1304 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■■■■■ 273.6
CNOT3-208ENST00000613073 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 SDR42E2A6NKP2 422 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 ZBTB24O43167 697 aaPredicted RBP16.73■□□□□ 0.27
CNOT3-208ENST00000613073 CABYRO75952 493 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 PROCP04070 461 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 SNRPAP09012 282 aaKnown RBP16.73■□□□□ 0.27
CNOT3-208ENST00000613073 SERPINB8P50452 374 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 PPIDQ08752 370 aaKnown RBP16.73■□□□□ 0.27
CNOT3-208ENST00000613073 TRAF7Q6Q0C0 670 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 HPS6Q86YV9 775 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 IRGQQ8WZA9 623 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 APOPT1Q96IL0 206 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 SYBUQ9NX95 663 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 RRN3Q9NYV6 651 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 NDUFA13Q9P0J0 144 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 DTNAQ9Y4J8 743 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 LOC100653049A0A140TA62 436 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 KRT34O76011 436 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 GPR15P49685 360 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 SULT2A1Q06520 285 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 CBLBQ13191 982 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 NOMO2Q5JPE7 1267 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 BTBD8Q5XKL5 378 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 OR52K1Q8NGK4 314 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 SRPK1Q96SB4 655 aaKnown RBP16.73■□□□□ 0.27
CNOT3-208ENST00000613073 C20orf27Q9GZN8 174 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 WWP1Q9H0M0 922 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 PRDM16Q9HAZ2 1276 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 STARD7Q9NQZ5 370 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 KCNK4Q9NYG8 393 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 UBP1Q9NZI7 540 aa16.73■□□□□ 0.27
CNOT3-208ENST00000613073 FAF1Q9UNN5 650 aaPredicted RBP16.73■□□□□ 0.27
CNOT3-208ENST00000613073 A0A1W2PQ45 241 aaPredicted RBP16.72■□□□□ 0.27
CNOT3-208ENST00000613073 A0A1W2PQY0 241 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 COPEO14579 308 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 MYCP01106 439 aaPredicted RBP16.72■□□□□ 0.27
CNOT3-208ENST00000613073 DHRS4L1P0CG22 281 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 CPOXP36551 454 aa16.72■□□□□ 0.27
CNOT3-208ENST00000613073 ZBTB17Q13105 803 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms