RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 POMKQ9H5K3 350 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 MPP6Q9NZW5 540 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 IGSF9Q9P2J2 1179 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 STK39Q9UEW8 545 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PSMD13Q9UNM6 376 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 COPG1Q9Y678 874 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PSME4Q14997 1843 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 TIMM44O43615 452 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 SLC35E2BP0CK96 405 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 CYP2B6P20813 491 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 KCNA5P22460 613 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 CDH13P55290 713 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 ANO4Q32M45 955 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 RBM20Q5T481 1227 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 IL23RQ5VWK5 629 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 ZC3HC1Q86WB0 502 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 FAM192AQ9GZU8 254 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 FBRSL1Q9HCM7 1045 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 CRTAC1Q9NQ79 661 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 NDFIP2Q9NV92 336 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 FNDC3AQ9Y2H6 1198 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 RAP2CQ9Y3L5 183 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 FAM95CA0A1B0GW59 222 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PIRO00625 290 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 FBXO21O94952 628 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PGK1P00558 417 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 MMP3P08254 477 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 BDNFP23560 247 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 NADK2Q4G0N4 442 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 AGKQ53H12 422 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 LIPMQ5VYY2 423 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PDZD4Q76G19 769 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 MFSD6LQ8IWD5 586 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 CENPLQ8N0S6 344 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 CEP70Q8NHQ1 597 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 SCAMP5Q8TAC9 235 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 HIC2Q96JB3 615 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 RPL10LQ96L21 214 aaKnown RBP14.25□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 ADAMTS10Q9H324 1103 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 MROH8Q9H579 483 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 TNFRSF12AQ9NP84 129 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 SFMBT1Q9UHJ3 866 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 IPPQ9Y573 584 aa14.25□□□□□ -0.13
COL6A1-207ENST00000612273 PARP14Q460N5 1801 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SHROOM3Q8TF72 1996 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 GPC4O75487 556 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 DAB1O75553 588 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 RNASEH2AO75792 299 aaKnown RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 DDHD2O94830 711 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SEC24DO94855 1032 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SMIM10L2AP0DMW4 78 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SMIM10L2BP0DMW5 78 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 GLDCP23378 1020 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 PPARGP37231 505 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 ETFBP38117 255 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 KYAT1Q16773 422 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 CNSTQ6PJW8 725 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 UGT2A3Q6UWM9 527 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 ZBTB46Q86UZ6 589 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 GPC2Q8N158 579 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 MYO1HQ8N1T3 1032 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 GPRC5AQ8NFJ5 357 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 FAM110BQ8TC76 370 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SENP8Q96LD8 212 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SMOQ99835 787 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 FSD1LQ9BXM9 530 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 WDR6Q9NNW5 1121 aaKnown RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 VCX3AQ9NNX9 186 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 CD4P01730 458 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 DARSP14868 501 aaKnown RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 ME2P23368 584 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 C11orf91Q3C1V1 193 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 TFAP2DQ7Z6R9 452 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 OR6P1Q8NGX9 317 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 B4GALNT2Q8NHY0 566 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 RNF217Q8TC41 542 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF419Q96HQ0 510 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 SIKE1Q9BRV8 207 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 STN1Q9H668 368 aaKnown RBP14.24□□□□□ -0.13
COL6A1-207ENST00000612273 CAAP1Q9H8G2 361 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 DNAJB4Q9UDY4 337 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 TTC3P53804 2025 aa14.24□□□□□ -0.13
COL6A1-207ENST00000612273 GPR32O75388 356 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 MPOP05164 745 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 MYL4P12829 197 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 STMN1P16949 149 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 YWHAQP27348 245 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 GJA5P36382 358 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 CDH17Q12864 832 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 LRRC8EQ6NSJ5 796 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 C16orf89Q6UX73 402 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 LSMEM2Q8N112 164 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 TXNDC5Q8NBS9 432 aaKnown RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 PDCD6IPQ8WUM4 868 aaKnown RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 HEXDCQ8WVB3 486 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 LRTOMTQ8WZ04 291 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 EMID1Q96A84 441 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 CIB1Q99828 191 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 MRPL1Q9BYD6 325 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms