RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 EDEM2Q9BV94 578 aa26.49■■□□□ 1.83
VEGFA-226ENST00000611736 NUSAP1Q9BXS6 441 aaKnown RBP26.49■■□□□ 1.83
VEGFA-226ENST00000611736 FSCN3Q9NQT6 498 aa26.49■■□□□ 1.83
VEGFA-226ENST00000611736 KLHL11Q9NVR0 708 aa26.49■■□□□ 1.83
VEGFA-226ENST00000611736 EVLQ9UI08 416 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-226ENST00000611736 EIF2B4Q9UI10 523 aaKnown RBP26.49■■□□□ 1.83
VEGFA-226ENST00000611736 CDV3Q9UKY7 258 aaKnown RBP26.49■■□□□ 1.83
VEGFA-226ENST00000611736 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-226ENST00000611736 LRRC72A6NJI9 287 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 J3KR12 359 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 RNF103O00237 685 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 DFFAO00273 331 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 LEFTY1O75610 366 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 GNSP15586 552 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 MAN1A1P33908 653 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 CYLC1P35663 651 aaPredicted RBP26.48■■□□□ 1.83
VEGFA-226ENST00000611736 AFMIDQ63HM1 303 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 SPC24Q8NBT2 197 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 OR2T34Q8NGX1 318 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 ARRDC3Q96B67 414 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 BIRC7Q96CA5 298 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 HEPHQ9BQS7 1158 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 ZDHHC6Q9H6R6 413 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 ETNK2Q9NVF9 386 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 UBA2Q9UBT2 640 aaPredicted RBP26.48■■□□□ 1.83
VEGFA-226ENST00000611736 SUSD2Q9UGT4 822 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 WASF2Q9Y6W5 498 aa26.48■■□□□ 1.83
VEGFA-226ENST00000611736 DNAH14Q0VDD8 3507 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 SOWAHDA6NJG2 315 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 MTA2O94776 668 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 LCA5LO95447 670 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 CD48P09326 243 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 MMRN1Q13201 1228 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 SPA17Q15506 151 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 ATXN7L2Q5T6C5 722 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-226ENST00000611736 AGBL4Q5VU57 503 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 KIAA0895LQ68EN5 471 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 SLC23A3Q6PIS1 610 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 TMCO3Q6UWJ1 677 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 RABEPKQ7Z6M1 372 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 TP53INP2Q8IXH6 220 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 NETO1Q8TDF5 533 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 TSC1Q92574 1164 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 DYRK4Q9NR20 520 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 ADAMTS9Q9P2N4 1935 aa26.47■■□□□ 1.83
VEGFA-226ENST00000611736 CNOT1A5YKK6 2376 aaKnown RBP26.46■■□□□ 1.83
VEGFA-226ENST00000611736 PRAMEF11O60813 436 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 GSRP00390 522 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 CDC25BP30305 580 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 GKP32189 559 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 ARHGAP25P42331 645 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 SNRPD1P62314 119 aaKnown RBP26.46■■□□□ 1.83
VEGFA-226ENST00000611736 INO80DQ53TQ3 878 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-226ENST00000611736 ZFYVE27Q5T4F4 411 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 ARHGAP36Q6ZRI8 547 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 TMTC1Q8IUR5 882 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 KCTD6Q8NC69 237 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 OR2AP1Q8NGE2 309 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 CASKIN2Q8WXE0 1202 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 SP110Q9HB58 689 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 PDFQ9HBH1 243 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 SLC6A14Q9UN76 642 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 TFR2Q9UP52 801 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 PCDHA13Q9Y5I0 950 aa26.46■■□□□ 1.83
VEGFA-226ENST00000611736 SLC7A4O43246 635 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 IGHV4-34P06331 123 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 SERPINF2P08697 491 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 KRT7P08729 469 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 SDHBP21912 280 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 FECHP22830 423 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 ARSEP51690 589 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 RHOAP61586 193 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 DPYSL3Q14195 570 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 PLPP6Q8IY26 295 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 LZTR1Q8N653 840 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 FAM131CQ96AQ9 280 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 GDAP1L1Q96MZ0 367 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 CALN1Q9BXU9 219 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 CAPN10Q9HC96 672 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 RCOR3Q9P2K3 495 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-226ENST00000611736 SLCO1B1Q9Y6L6 691 aa26.45■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3DA0A087WVF3 549 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3IA0A087WXS9 549 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3EA0A087X179 549 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3KA0A087X1G2 549 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 A0A1B0GTW7 788 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3FA6NER0 549 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3LB9A6J9 549 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 KRIT1O00522 736 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 BCAT2O15382 392 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-226ENST00000611736 PLRG1O43660 514 aaKnown RBP26.44■■□□□ 1.82
VEGFA-226ENST00000611736 IGSF6O95976 241 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3HP0C7X1 549 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 IL4RP24394 825 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 NOP2P46087 812 aaKnown RBP26.44■■□□□ 1.82
VEGFA-226ENST00000611736 PUM1Q14671 1186 aaKnown RBP eCLIP26.44■■□□□ 1.821e-7■■■□□ 15.4
VEGFA-226ENST00000611736 CYTH1Q15438 398 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 PIP5KL1Q5T9C9 394 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 STPG1Q5TH74 334 aa26.44■■□□□ 1.82
VEGFA-226ENST00000611736 TBC1D3GQ6DHY5 549 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms