RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TMIEQ8NEW7 156 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 GANCQ8TET4 914 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 HES6Q96HZ4 224 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 GDAP1L1Q96MZ0 367 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 OMDQ99983 421 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 HEPHQ9BQS7 1158 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 CINPQ9BW66 212 aaPredicted RBP14.5□□□□□ -0.09
CTSA-219ENST00000607841 TM6SF2Q9BZW4 377 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 BRD8Q9H0E9 1235 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 PABPC3Q9H361 631 aaKnown RBP14.5□□□□□ -0.09
CTSA-219ENST00000607841 DTLQ9NZJ0 730 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 USP36Q9P275 1121 aaKnown RBP14.5□□□□□ -0.09
CTSA-219ENST00000607841 SEPT3Q9UH03 358 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 IL36AQ9UHA7 158 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 RAB23Q9ULC3 237 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 PPM1HQ9ULR3 514 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 DOCK4Q8N1I0 1966 aa14.5□□□□□ -0.09
CTSA-219ENST00000607841 GOLGA6L9A6NEM1 432 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 PPP1R12AO14974 1030 aaPredicted RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 RHOBTB1O94844 696 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 TJP3O95049 919 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 POP4O95707 220 aaKnown RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 IGLV3-19P01714 112 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 MSNP26038 577 aaKnown RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 CD6P30203 668 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 PTPN7P35236 360 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 HSPA9P38646 679 aaKnown RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 PSMD8P48556 350 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 TPMTP51580 245 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 CCNHP51946 323 aaPredicted RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 ZNF33AQ06730 810 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 NSUN2Q08J23 767 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTSA-219ENST00000607841 LBRQ14739 615 aaKnown RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 RPS6KA1Q15418 735 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 MYLK3Q32MK0 819 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 CCDC181Q5TID7 509 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 MARC1Q5VT66 337 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 CCNYQ8ND76 341 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 PIP4K2CQ8TBX8 421 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 RLN3Q8WXF3 142 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 ALG3Q92685 438 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 P3H4Q92791 437 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 FATE1Q969F0 183 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 HDAC11Q96DB2 347 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 PPP1R16AQ96I34 528 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 TSGA13Q96PP4 275 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 OSBPL8Q9BZF1 889 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 EPC1Q9H2F5 836 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 DYRK4Q9NR20 520 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 FAM86C1Q9NVL1 165 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 PACSIN2Q9UNF0 486 aaPredicted RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 CYP8B1Q9UNU6 501 aa14.49□□□□□ -0.09
CTSA-219ENST00000607841 MUC22E2RYF6 1773 aaPredicted RBP14.49□□□□□ -0.09
CTSA-219ENST00000607841 ATG2BQ96BY7 2078 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 CACNA1IQ9P0X4 2223 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 IGHV1OR15-9A0A0B4J2B8 117 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 MATN3O15232 486 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 MID1O15344 667 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 DDX3YO15523 660 aaKnown RBP14.48□□□□□ -0.09
CTSA-219ENST00000607841 NDUFS2O75306 463 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 NEBLO76041 1014 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 PYGMP11217 842 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 MAPK8P45983 427 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 NHLH1Q02575 133 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 SLC10A2Q12908 348 aaPredicted RBP14.48□□□□□ -0.09
CTSA-219ENST00000607841 SRSF5Q13243 272 aaKnown RBP14.48□□□□□ -0.09
CTSA-219ENST00000607841 HNRNPDQ14103 355 aaKnown RBP14.48□□□□□ -0.09
CTSA-219ENST00000607841 ZNF235Q14590 738 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 GRM3Q14832 879 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 LLGL1Q15334 1064 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 ELF2Q15723 593 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 SPDYCQ5MJ68 293 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 MEI1Q5TIA1 1274 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 PRR23BQ6ZRT6 265 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 BBS12Q6ZW61 710 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 ALYREFQ86V81 257 aaKnown RBP14.48□□□□□ -0.09
CTSA-219ENST00000607841 CCDC13Q8IYE1 715 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 HDDC3Q8N4P3 179 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 CHST14Q8NCH0 376 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 PSKH2Q96QS6 385 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 HEMGNQ9BXL5 484 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 OSBPL1AQ9BXW6 950 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 BTBD1Q9H0C5 482 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 FBXL12Q9NXK8 326 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 FZD4Q9ULV1 537 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 INVSQ9Y283 1065 aa14.48□□□□□ -0.09
CTSA-219ENST00000607841 A0A1W2PP55 124 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 PROB1E7EW31 1015 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 KPNA3O00505 521 aaPredicted RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 KRIT1O00522 736 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 KIF5CO60282 957 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 LEFTY1O75610 366 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 RNASEH2AO75792 299 aaKnown RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 MAP3K6O95382 1288 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 PEX11BO96011 259 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 MMP13P45452 471 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 CSNK1DP48730 415 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 PPIDQ08752 370 aaKnown RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 SLC10A7Q0GE19 358 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms