RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 MFAP3LO75121 409 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 ADRB1P08588 477 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 ITGB7P26010 798 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 EIF4A3P38919 411 aaKnown RBP17.5■□□□□ 0.39
HERC3-214ENST00000601319 HCAR3P49019 387 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 TAS2R38P59533 333 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 PPP2CBP62714 309 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 PPP2CAP67775 309 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 DPYSL2Q16555 572 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 ASTE1Q2TB18 679 aaPredicted RBP17.5■□□□□ 0.39
HERC3-214ENST00000601319 UAP1L1Q3KQV9 507 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 INO80DQ53TQ3 878 aaPredicted RBP17.5■□□□□ 0.39
HERC3-214ENST00000601319 CCDC122Q5T0U0 273 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 NEK5Q6P3R8 708 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 RFX8Q6ZV50 586 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 PIP4P1Q86T03 277 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 OR2AP1Q8NGE2 309 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 GRIN3AQ8TCU5 1115 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 ARRDC3Q96B67 414 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 KCTD15Q96SI1 283 aaPredicted RBP17.5■□□□□ 0.39
HERC3-214ENST00000601319 HEPHQ9BQS7 1158 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 NUP85Q9BW27 656 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 DYRK4Q9NR20 520 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 IP6K2Q9UHH9 426 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 ANAPC7Q9UJX3 599 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 DMTF1Q9Y222 760 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 PCNX2A6NKB5 2137 aa17.5■□□□□ 0.39
HERC3-214ENST00000601319 TRPM6Q9BX84 2022 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 PLK4O00444 970 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 VILLO15195 856 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 LEFTY1O75610 366 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 TMCC1O94876 653 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 CEACAM1P13688 526 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 CSNK1EP49674 416 aaKnown RBP17.49■□□□□ 0.39
HERC3-214ENST00000601319 NOVA1P51513 510 aaKnown RBP17.49■□□□□ 0.39
HERC3-214ENST00000601319 SNRPD1P62314 119 aaKnown RBP17.49■□□□□ 0.39
HERC3-214ENST00000601319 POM121L1PQ3SYA9 428 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 BOLA3Q53S33 107 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 ARSIQ5FYB1 569 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 AFMIDQ63HM1 303 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 ERN2Q76MJ5 926 aaKnown RBP17.49■□□□□ 0.39
HERC3-214ENST00000601319 OR2I1PQ8NGU4 316 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 TEKT4Q8WW24 435 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 ARHGEF26Q96DR7 871 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 TM6SF2Q9BZW4 377 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 KLC2Q9H0B6 622 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 EBF2Q9HAK2 575 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 PDFQ9HBH1 243 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 ZNHIT6Q9NWK9 470 aaKnown RBP17.49■□□□□ 0.39
HERC3-214ENST00000601319 ACTL7AQ9Y615 435 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 SHROOM3Q8TF72 1996 aa17.49■□□□□ 0.39
HERC3-214ENST00000601319 KNL1Q8NG31 2342 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3DA0A087WVF3 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3IA0A087WXS9 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3EA0A087X179 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3KA0A087X1G2 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 A0A1B0GVT2 93 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3FA6NER0 549 aaPredicted RBP17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3LB9A6J9 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 BUB1O43683 1085 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3HP0C7X1 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 CD59P13987 128 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 IL1R2P27930 398 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 NEK3P51956 506 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 SLC25A11Q02978 314 aaKnown RBP17.48■□□□□ 0.39
HERC3-214ENST00000601319 DPYSQ14117 519 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 PPP6R3Q5H9R7 873 aaPredicted RBP17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3GQ6DHY5 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3CQ6IPX1 549 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 NAPEPLDQ6IQ20 393 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 PSAPL1Q6NUJ1 521 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 TBC1D3Q8IZP1 549 aaPredicted RBP17.48■□□□□ 0.39
HERC3-214ENST00000601319 VOPP1Q96AW1 172 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 GDAP1L1Q96MZ0 367 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 SLC6A18Q96N87 628 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 OSBPL1AQ9BXW6 950 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 UVRAGQ9P2Y5 699 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 HECAQ9UBI9 543 aaPredicted RBP17.48■□□□□ 0.39
HERC3-214ENST00000601319 LCMT1Q9UIC8 334 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 ANKRD6Q9Y2G4 727 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 PCDHGB2Q9Y5G2 931 aa17.48■□□□□ 0.39
HERC3-214ENST00000601319 COL5A1P20908 1838 aaPredicted RBP17.48■□□□□ 0.39
HERC3-214ENST00000601319 LRRK1Q38SD2 2015 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 ARHGAP42A6NI28 874 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 H3BRJ5 948 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 RNF103O00237 685 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 PRAMEF11O60813 436 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 ERCC2P18074 760 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 CTSKP43235 329 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 DNA2P51530 1060 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 TSR1Q2NL82 804 aaKnown RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 KIF19Q2TAC6 998 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 HLA-BQ31612 363 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 SETMARQ53H47 684 aaPredicted RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 PRPF39Q86UA1 669 aaKnown RBP17.47■□□□□ 0.39
HERC3-214ENST00000601319 ZNF354CQ86Y25 554 aa17.47■□□□□ 0.39
HERC3-214ENST00000601319 CNGA4Q8IV77 575 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms