RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	HEPH	Q9BQS7	1158 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PACSIN1	Q9BY11	444 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ZDHHC5	Q9C0B5	715 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DEF6	Q9H4E7	631 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	EBF2	Q9HAK2	575 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TM9SF3	Q9HD45	589 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CTTNBP2NL	Q9P2B4	639 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	UVRAG	Q9P2Y5	699 aa		13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	HECA	Q9UBI9	543 aa	Predicted RBP	13.72	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	KPNA3	O00505	521 aa	Predicted RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	LAT	O43561	262 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PLRG1	O43660	514 aa	Known RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	LEFTY1	O75610	366 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	GSR	P00390	522 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TMEM253	P0C7T8	217 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	AFF3	P51826	1226 aa	Known RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	CCNH	P51946	323 aa	Predicted RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	BNC1	Q01954	994 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DPYSL2	Q16555	572 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	MYLK3	Q32MK0	819 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	POM121L1P	Q3SYA9	428 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	PIP5KL1	Q5T9C9	394 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	AGBL4	Q5VU57	503 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	AFMID	Q63HM1	303 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TXNRD3NB	Q6F5E7	133 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ZNF354C	Q86Y25	554 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	OR2AP1	Q8NGE2	309 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	TEKT4	Q8WW24	435 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	VOPP1	Q96AW1	172 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	ARRDC3	Q96B67	414 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	LRIG1	Q96JA1	1093 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	GTPBP2	Q9BX10	602 aa	Known RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	HDAC8	Q9BY41	377 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	SLC39A8	Q9C0K1	460 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	DNAAF2	Q9NVR5	837 aa	Known RBP	13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NCOR2	Q9Y618	2525 aa		13.71	□□□□□ -0.21
ARHGEF1-222	ENST00000600517	NUMA1	Q14980	2115 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517		H3BRJ5	948 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PRAMEF11	O60813	436 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	GJB3	O75712	270 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TMCC1	O94876	653 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PROSC	O94903	275 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	POP4	O95707	220 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	CSNK1E	P49674	416 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PAPOLA	P51003	745 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TAS2R38	P59533	333 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	SNRPD1	P62314	119 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	RACK1	P63244	317 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	SLC25A11	Q02978	314 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	GRIK2	Q13002	908 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	DPYS	Q14117	519 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	NEK5	Q6P3R8	708 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ERN2	Q76MJ5	926 aa	Known RBP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	POLN	Q7Z5Q5	900 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	GAS2L3	Q86XJ1	694 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	MINDY1	Q8N5J2	469 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	LZTR1	Q8N653	840 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TC2N	Q8N9U0	490 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	GRIN3A	Q8TCU5	1115 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	HSPH1	Q92598	858 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	MRFAP1L1	Q96HT8	127 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PPP1R16A	Q96I34	528 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TM6SF2	Q9BZW4	377 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ZWILCH	Q9H900	591 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	DYRK4	Q9NR20	520 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	SPTLC3	Q9NUV7	552 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	LCMT1	Q9UIC8	334 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	CEP192	Q8TEP8	1941 aa		13.7	□□□□□ -0.22
ARHGEF1-222	ENST00000600517		A0A1B0GVT2	93 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ARHGAP42	A6NI28	874 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	UPK3BL1	B0FP48	263 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	UPK3BL2	E5RIL1	263 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517		J3KR12	359 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	CSRP1	P21291	193 aa	Known RBP	13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ITGB7	P26010	798 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	NUDT1	P36639	197 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ARL4A	P40617	200 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	GRIA4	P48058	902 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ZNF75D	P51815	510 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	SLC14A1	Q13336	389 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	CYTH1	Q15438	398 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TEAD4	Q15561	434 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	HADH	Q16836	314 aa	Known RBP	13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	SMTNL2	Q2TAL5	461 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	UAP1L1	Q3KQV9	507 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PPM1J	Q5JR12	505 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	IL27RA	Q6UWB1	636 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TRIM69	Q86WT6	500 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	ARHGAP12	Q8IWW6	846 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	RYBP	Q8N488	228 aa	Predicted RBP	13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	OR2I1P	Q8NGU4	316 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	FAM71B	Q8TC56	605 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	TSC1	Q92574	1164 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	CELF6	Q96J87	481 aa	Known RBP	13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	CSPG4P5	Q96PW8	444 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PDF	Q9HBH1	243 aa		13.69	□□□□□ -0.22
ARHGEF1-222	ENST00000600517	PCDH18	Q9HCL0	1135 aa		13.69	□□□□□ -0.22

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