RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 KLHL8Q9P2G9 620 aaPredicted RBP9.46□□□□□ -0.9
ZNF548-206ENST00000597047 SEPT3Q9UH03 358 aa9.46□□□□□ -0.9
ZNF548-206ENST00000597047 ZNF148Q9UQR1 794 aa9.46□□□□□ -0.9
ZNF548-206ENST00000597047 PGRMC1O00264 195 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 PLK4O00444 970 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 KPNA3O00505 521 aaPredicted RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 NPC1O15118 1278 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 MATN3O15232 486 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 INSIG1O15503 277 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 ATP9BO43861 1147 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 GJB3O75712 270 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 STK10O94804 968 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CD160O95971 181 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 IFNB1P01574 187 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 DNTTP04053 509 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CHRNA3P32297 505 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 PTPN7P35236 360 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 RPS9P46781 194 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 KCNJ1P48048 391 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 RENBPP51606 427 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CCR3P51677 355 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CLCN6P51797 869 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CCNHP51946 323 aaPredicted RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 NRLP54845 237 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 SNRPD1P62314 119 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 RAD51Q06609 339 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 PPIDQ08752 370 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 NOMO1Q15155 1222 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CRY1Q16526 586 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 HNRNPA1L2Q32P51 320 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CFAP58Q5T655 872 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 C9orf64Q5T6V5 341 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 DPY19L3Q6ZPD9 716 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 NYAP1Q6ZVC0 841 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 SYT13Q7L8C5 426 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 PID1Q7Z2X4 250 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 KDELC2Q7Z4H8 507 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 SRLQ86TD4 932 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 TMPRSS6Q8IU80 811 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 CDKL3Q8IVW4 592 aaPredicted RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 PDCD6IPQ8WUM4 868 aaKnown RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 UBE2Q2Q8WVN8 375 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 HTR3CQ8WXA8 447 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 PTPRN2Q92932 1015 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 HDAC11Q96DB2 347 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 MYO19Q96H55 970 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 GDAP1L1Q96MZ0 367 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 NAP1L3Q99457 506 aaPredicted RBP9.45□□□□□ -0.9
ZNF548-206ENST00000597047 C1QTNF1Q9BXJ1 281 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 TMEM245Q9H330 911 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 C11orf16Q9NQ32 467 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 UBP1Q9NZI7 540 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 IL36AQ9UHA7 158 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 DNPEPQ9ULA0 475 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 HS3ST2Q9Y278 367 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 EFR3BQ9Y2G0 817 aa9.45□□□□□ -0.9
ZNF548-206ENST00000597047 GOLGA6L10A0A0M3HER8 536 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 A0A1W2PQF6 199 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 TARSL2A2RTX5 802 aaKnown RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PRR23AA6NEV1 266 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 FAM47DPA6NHR8 397 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 HACD1B0YJ81 288 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 CHURC1-FNTBB4DL54 471 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 RNF103O00237 685 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 MUSKO15146 869 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 GPR37L1O60883 481 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 LEFTY1O75610 366 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 RNASEH2AO75792 299 aaKnown RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PIGNO95427 931 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 HLA-DQB2P05538 268 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 UGT2B4P06133 528 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 MAGEA9P43362 315 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 RGRP47804 291 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 FNTBP49356 437 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 DMWDQ09019 674 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 ZBTB17Q13105 803 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 BYSLQ13895 437 aaKnown RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 RFTN1Q14699 578 aaPredicted RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 TRIP13Q15645 432 aaPredicted RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PCSK7Q16549 785 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 MYLK3Q32MK0 819 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 SLC45A4Q5BKX6 768 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PAPD7Q5XG87 772 aaKnown RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 BMP8AQ7Z5Y6 402 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PRUNE1Q86TP1 453 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 LRRC49Q8IUZ0 686 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 C1orf210Q8IVY1 113 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 KLHL7Q8IXQ5 586 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 DEFB119Q8N690 84 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PCDH20Q8N6Y1 951 aaKnown RBP9.44□□□□□ -0.9
ZNF548-206ENST00000597047 FAM71DQ8N9W8 422 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 OR2AP1Q8NGE2 309 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 OR2T3Q8NH03 318 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 PIP4K2CQ8TBX8 421 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 FRS2Q8WU20 508 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 CASKIN2Q8WXE0 1202 aa9.44□□□□□ -0.9
ZNF548-206ENST00000597047 RLN3Q8WXF3 142 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms