RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RAB23Q9ULC3 237 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 NCKAP1Q9Y2A7 1128 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 HEY1Q9Y5J3 304 aa14.6□□□□□ -0.07
LIG1-208ENST00000595758 FANCMQ8IYD8 2048 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 IGHV1OR15-9A0A0B4J2B8 117 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 C1QTNF3-AMACRE9PGA6 284 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 CST8O60676 142 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 MAP3K6O95382 1288 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 POP4O95707 220 aaKnown RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 IGSF6O95976 241 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 IGLV3-19P01714 112 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 PRNPP04156 253 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 BCKDHBP21953 392 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 CD6P30203 668 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 CETN2P41208 172 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 GARSP41250 739 aaKnown RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 COPS2P61201 443 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 SLC10A2Q12908 348 aaPredicted RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 ELF2Q15723 593 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 PPP2R5EQ16537 467 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 MYLK3Q32MK0 819 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 PLK5Q496M5 336 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 ARSIQ5FYB1 569 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 ATXN7L2Q5T6C5 722 aaPredicted RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 TMCO4Q5TGY1 634 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 SLC36A4Q6YBV0 504 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 USP30Q70CQ3 517 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 FAM124AQ86V42 546 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 KBTBD6Q86V97 674 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 HDDC3Q8N4P3 179 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 OR6K2Q8NGY2 324 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 PIP4K2CQ8TBX8 421 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 GRIN3AQ8TCU5 1115 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 NSMCE1Q8WV22 266 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 UBE2Q2Q8WVN8 375 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 NKD2Q969F2 451 aaPredicted RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 TOE1Q96GM8 510 aaKnown RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 ZC3H10Q96K80 434 aaKnown RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 GDAP1L1Q96MZ0 367 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 ALS2CR12Q96Q35 445 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 PHOX2BQ99453 314 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 OMDQ99983 421 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 CINPQ9BW66 212 aaPredicted RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 FBXL12Q9NXK8 326 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 DTLQ9NZJ0 730 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 LHX3Q9UBR4 397 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 SEPT3Q9UH03 358 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 IL36AQ9UHA7 158 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 SARDHQ9UL12 918 aa14.59□□□□□ -0.07
LIG1-208ENST00000595758 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 SMG5Q9UPR3 1016 aaKnown RBP14.59□□□□□ -0.07
LIG1-208ENST00000595758 hCG_1818297A0A087WSY0 165 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 KRIT1O00522 736 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 ZSCAN12O43309 604 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 NDUFS2O75306 463 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 LEFTY1O75610 366 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 RNASEH2AO75792 299 aaKnown RBP14.58□□□□□ -0.08
LIG1-208ENST00000595758 RHOBTB1O94844 696 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 PEX11BO96011 259 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 LMNAP02545 664 aaKnown RBP14.58□□□□□ -0.08
LIG1-208ENST00000595758 CTSLP07711 333 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 RAD51Q06609 339 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 SLC10A7Q0GE19 358 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 LBRQ14739 615 aaKnown RBP14.58□□□□□ -0.08
LIG1-208ENST00000595758 LPAL2Q16609 132 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 POM121L1PQ3SYA9 428 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 LPCAT2Q7L5N7 544 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 AADATQ8N5Z0 425 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 SUMF1Q8NBK3 374 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 CCNYQ8ND76 341 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 HES6Q96HZ4 224 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 TSGA13Q96PP4 275 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 HEMGNQ9BXL5 484 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 DUSP15Q9H1R2 295 aaPredicted RBP14.58□□□□□ -0.08
LIG1-208ENST00000595758 ZDHHC6Q9H6R6 413 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 WSB2Q9NYS7 404 aaPredicted RBP14.58□□□□□ -0.08
LIG1-208ENST00000595758 WASF2Q9Y6W5 498 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 SDK1Q7Z5N4 2213 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 EML5Q05BV3 1969 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 GPR179Q6PRD1 2367 aa14.58□□□□□ -0.08
LIG1-208ENST00000595758 NYNRINQ9P2P1 1898 aaKnown RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 ZFHX2Q9C0A1 2572 aaPredicted RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 A0A1W2PP55 124 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 KPNA3O00505 521 aaPredicted RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 DDX3YO15523 660 aaKnown RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 PYGMP11217 842 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 TGM2P21980 687 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 CCNCP24863 283 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 GKP32189 559 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 PTPN7P35236 360 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 NR2C2P49116 596 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 RENBPP51606 427 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 METAP1P53582 386 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 RPL6Q02878 288 aaKnown RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 ADCY2Q08462 1091 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 ZNF235Q14590 738 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 PDK1Q15118 436 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
LIG1-208ENST00000595758 TIGD7Q6NT04 549 aaPredicted RBP14.57□□□□□ -0.08
LIG1-208ENST00000595758 NPNTQ6UXI9 565 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms