RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 EEF2KO00418 725 aaKnown RBP27.73■■■□□ 2.03
SMAD4-213ENST00000591914 RASA4O43374 803 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 LEFTY1O75610 366 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 KCNA4P22459 653 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 EIF4A3P38919 411 aaKnown RBP27.73■■■□□ 2.03
SMAD4-213ENST00000591914 NOVA1P51513 510 aaKnown RBP27.73■■■□□ 2.03
SMAD4-213ENST00000591914 DNA2P51530 1060 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 SERINC3Q13530 473 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 PIGHQ14442 188 aaPredicted RBP27.73■■■□□ 2.03
SMAD4-213ENST00000591914 LEKR1Q6ZMV7 388 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 NIPA2Q8N8Q9 360 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 ARHGEF26Q96DR7 871 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 HEPHQ9BQS7 1158 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 NUP85Q9BW27 656 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 HDAC8Q9BY41 377 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 TM6SF2Q9BZW4 377 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 LRRC19Q9H756 370 aa27.73■■■□□ 2.03
SMAD4-213ENST00000591914 BUB1O43683 1085 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 CER1O95813 267 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 CEACAM1P13688 526 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 CD59P13987 128 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 ZNF135P52742 658 aaPredicted RBP27.72■■■□□ 2.03
SMAD4-213ENST00000591914 CCDC15Q0P6D6 951 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 RFX8Q6ZV50 586 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 TRIM69Q86WT6 500 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 CASKIN2Q8WXE0 1202 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 PPP1R16AQ96I34 528 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 SLC6A18Q96N87 628 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 PREBQ9HCU5 417 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 DYRK4Q9NR20 520 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 HECAQ9UBI9 543 aaPredicted RBP27.72■■■□□ 2.03
SMAD4-213ENST00000591914 ANKRD6Q9Y2G4 727 aa27.72■■■□□ 2.03
SMAD4-213ENST00000591914 GIPC1O14908 333 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 GSRP00390 522 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 IL1R2P27930 398 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 HCAR3P49019 387 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 NDST2P52849 883 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 SLC18A3Q16572 532 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 KIF19Q2TAC6 998 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 ASTE1Q2TB18 679 aaPredicted RBP27.71■■■□□ 2.03
SMAD4-213ENST00000591914 HLA-BQ31612 363 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 INO80DQ53TQ3 878 aaPredicted RBP27.71■■■□□ 2.03
SMAD4-213ENST00000591914 PPP6R3Q5H9R7 873 aaPredicted RBP27.71■■■□□ 2.03
SMAD4-213ENST00000591914 LAYNQ6UX15 382 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 ERN2Q76MJ5 926 aaKnown RBP27.71■■■□□ 2.03
SMAD4-213ENST00000591914 ZNF354CQ86Y25 554 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 OR2AP1Q8NGE2 309 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 GAREM1Q9H706 876 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 IL21RQ9HBE5 538 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 IP6K2Q9UHH9 426 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 ANAPC7Q9UJX3 599 aa27.71■■■□□ 2.03
SMAD4-213ENST00000591914 VILLO15195 856 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 TMCC1O94876 653 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 TCF4P15884 667 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 ITGB7P26010 798 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 MAPK8IP2Q13387 824 aaPredicted RBP27.7■■■□□ 2.02
SMAD4-213ENST00000591914 N4BP2L1Q5TBK1 243 aaPredicted RBP27.7■■■□□ 2.02
SMAD4-213ENST00000591914 DEFB124Q8NES8 71 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 VOPP1Q96AW1 172 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 BTBD6Q96KE9 485 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 ABHD10Q9NUJ1 306 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 SNX11Q9Y5W9 270 aa27.7■■■□□ 2.02
SMAD4-213ENST00000591914 SSU72P8A0A1W2PR75 194 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 MFAP3LO75121 409 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 TPM1P09493 284 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 ZNF883P0CG24 379 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 ERCC2P18074 760 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 NUDT1P36639 197 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 SNRPD1P62314 119 aaKnown RBP27.69■■■□□ 2.02
SMAD4-213ENST00000591914 DPYSL2Q16555 572 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 BOLA3Q53S33 107 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 KCNT1Q5JUK3 1230 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 AFMIDQ63HM1 303 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 NEK5Q6P3R8 708 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 SARM1Q6SZW1 724 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 LRIG1Q96JA1 1093 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 SERAC1Q96JX3 654 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 SLC32A1Q9H598 525 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 ZDHHC6Q9H6R6 413 aa27.69■■■□□ 2.02
SMAD4-213ENST00000591914 ZNHIT6Q9NWK9 470 aaKnown RBP27.69■■■□□ 2.02
SMAD4-213ENST00000591914 CWC15Q9P013 229 aaKnown RBP27.69■■■□□ 2.02
SMAD4-213ENST00000591914 FNDC3AQ9Y2H6 1198 aaKnown RBP27.69■■■□□ 2.02
SMAD4-213ENST00000591914 KNL1Q8NG31 2342 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 WNT9AO14904 365 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 DAPK3O43293 454 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 CTSKP43235 329 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 DPYSQ14117 519 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 ADAT2Q7Z6V5 191 aaKnown RBP27.68■■■□□ 2.02
SMAD4-213ENST00000591914 PRPF39Q86UA1 669 aaKnown RBP27.68■■■□□ 2.02
SMAD4-213ENST00000591914 OR6K2Q8NGY2 324 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 CELF6Q96J87 481 aaKnown RBP27.68■■■□□ 2.02
SMAD4-213ENST00000591914 PDFQ9HBH1 243 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 AASDHPPTQ9NRN7 309 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 DMTF1Q9Y222 760 aa27.68■■■□□ 2.02
SMAD4-213ENST00000591914 A0A1W2PR77 199 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 POP4O95707 220 aaKnown RBP27.67■■■□□ 2.02
SMAD4-213ENST00000591914 WNT1P04628 370 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 CD38P28907 300 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 MAT2AP31153 395 aaKnown RBP27.67■■■□□ 2.02
SMAD4-213ENST00000591914 NEK3P51956 506 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms