RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 TBC1D3HP0C7X1 549 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 RARAP10276 462 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 ERCC2P18074 760 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 CCNHP51946 323 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 CCDC15Q0P6D6 951 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 DPYSL2Q16555 572 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 SMTNL2Q2TAL5 461 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 INO80DQ53TQ3 878 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TBC1D3GQ6DHY5 549 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TBC1D3CQ6IPX1 549 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TBC1D3Q8IZP1 549 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 MINDY1Q8N5J2 469 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 ZNF564Q8TBZ8 553 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TEKT4Q8WW24 435 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 CASKIN2Q8WXE0 1202 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 HSPH1Q92598 858 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 ARRDC3Q96B67 414 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TM6SF2Q9BZW4 377 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 ZDHHC5Q9C0B5 715 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 ZWILCHQ9H900 591 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TM9SF3Q9HD45 589 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 DYRK4Q9NR20 520 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 UVRAGQ9P2Y5 699 aa16.7■□□□□ 0.26
CIRBP-233ENST00000591622 HECAQ9UBI9 543 aaPredicted RBP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
CIRBP-233ENST00000591622 CEP192Q8TEP8 1941 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 A0A1W2PPC4 97 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 H3BRJ5 948 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 LATO43561 262 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 GSRP00390 522 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 TMEM253P0C7T8 217 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 CSNK1EP49674 416 aaKnown RBP16.69■□□□□ 0.26
CIRBP-233ENST00000591622 SNRPD1P62314 119 aaKnown RBP16.69■□□□□ 0.26
CIRBP-233ENST00000591622 FOXK2Q01167 660 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 SLC25A11Q02978 314 aaKnown RBP16.69■□□□□ 0.26
CIRBP-233ENST00000591622 GRIK2Q13002 908 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 DPYSQ14117 519 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 UAP1L1Q3KQV9 507 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 PIP5KL1Q5T9C9 394 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 TXNRD3NBQ6F5E7 133 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 RYBPQ8N488 228 aaPredicted RBP16.69■□□□□ 0.26
CIRBP-233ENST00000591622 OR2AP1Q8NGE2 309 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 PPP1R16AQ96I34 528 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 CELF6Q96J87 481 aaKnown RBP16.69■□□□□ 0.26
CIRBP-233ENST00000591622 HDAC8Q9BY41 377 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 SLC39A8Q9C0K1 460 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 EBF2Q9HAK2 575 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 SPTLC3Q9NUV7 552 aa16.69■□□□□ 0.26
CIRBP-233ENST00000591622 NYNRINQ9P2P1 1898 aaKnown RBP16.69■□□□□ 0.26
CIRBP-233ENST00000591622 ARHGAP42A6NI28 874 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 TMCC1O94876 653 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 PROSCO94903 275 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 ARL4AP40617 200 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 GRIA4P48058 902 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 PAPOLAP51003 745 aaKnown RBP16.68■□□□□ 0.26
CIRBP-233ENST00000591622 TAS2R38P59533 333 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 PPP2CBP62714 309 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 RACK1P63244 317 aaKnown RBP16.68■□□□□ 0.26
CIRBP-233ENST00000591622 PPP2CAP67775 309 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 BNC1Q01954 994 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 TEAD4Q15561 434 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 PPM1JQ5JR12 505 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 AFMIDQ63HM1 303 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 ERN2Q76MJ5 926 aaKnown RBP16.68■□□□□ 0.26
CIRBP-233ENST00000591622 POLNQ7Z5Q5 900 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 TC2NQ8N9U0 490 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 OR2I1PQ8NGU4 316 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 LRIG1Q96JA1 1093 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 ZDHHC6Q9H6R6 413 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 PREBQ9HCU5 417 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 DNAAF2Q9NVR5 837 aaKnown RBP16.68■□□□□ 0.26
CIRBP-233ENST00000591622 LCMT1Q9UIC8 334 aa16.68■□□□□ 0.26
CIRBP-233ENST00000591622 A0A1B0GVT2 93 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 J3KR12 359 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 KRIT1O00522 736 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 PRAMEF11O60813 436 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 OPHN1O60890 802 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 POP4O95707 220 aaKnown RBP16.67■□□□□ 0.26
CIRBP-233ENST00000591622 ITGB7P26010 798 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
CIRBP-233ENST00000591622 ZNF75DP51815 510 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 HADHQ16836 314 aaKnown RBP16.67■□□□□ 0.26
CIRBP-233ENST00000591622 MYLK3Q32MK0 819 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 IL27RAQ6UWB1 636 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 TRIM69Q86WT6 500 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 GAS2L3Q86XJ1 694 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 ARHGAP12Q8IWW6 846 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 LZTR1Q8N653 840 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 NPWQ8N729 165 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 OR6K2Q8NGY2 324 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 VOPP1Q96AW1 172 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 MRFAP1L1Q96HT8 127 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 GDAP1L1Q96MZ0 367 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 CSPG4P5Q96PW8 444 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 PDFQ9HBH1 243 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 PCDH18Q9HCL0 1135 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 UBA2Q9UBT2 640 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-233ENST00000591622 PCDH15Q96QU1 1955 aa16.67■□□□□ 0.26
CIRBP-233ENST00000591622 GJB3O75712 270 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms