RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FATE1Q969F0 183 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 SIPA1Q96FS4 1042 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 GDAP1L1Q96MZ0 367 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 FAM126AQ9BYI3 521 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-214ENST00000590556 LHX3Q9UBR4 397 aa19.46■□□□□ 0.71
DDX39A-214ENST00000590556 CCDC163A0A0D9SF12 145 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 AXIN1O15169 862 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ALOX15BO15296 676 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 IGSF6O95976 241 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ATP1A1P05023 1023 aaKnown RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 CXCR5P32302 372 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 RENBPP51606 427 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 RPS14P62263 151 aaKnown RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 OTUD4Q01804 1114 aaKnown RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ZNF33AQ06730 810 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ZNF235Q14590 738 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ATXN7L2Q5T6C5 722 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ZC3H18Q86VM9 953 aaKnown RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 CACUL1Q86Y37 369 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 MMAAQ8IVH4 418 aaKnown RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 TTC13Q8NBP0 860 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 CHST14Q8NCH0 376 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 OR2AP1Q8NGE2 309 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 ACTL9Q8TC94 416 aa19.45■□□□□ 0.7
DDX39A-214ENST00000590556 HECAQ9UBI9 543 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-214ENST00000590556 CEP104O60308 925 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 IL1BP01584 269 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 CCNB1P14635 433 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 CHRNA3P32297 505 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 HSPA9P38646 679 aaKnown RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 MMP13P45452 471 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 PSMD8P48556 350 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 CCNHP51946 323 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 KLF1Q13351 362 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 XRCC4Q13426 336 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 HNRNPDQ14103 355 aaKnown RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 NOMO1Q15155 1222 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 MYLK3Q32MK0 819 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 B4GALNT4Q76KP1 1039 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 WDR5BQ86VZ2 330 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 LONP2Q86WA8 852 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 SLC13A5Q86YT5 568 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 TSEN2Q8NCE0 465 aaKnown RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 TFB1MQ8WVM0 346 aaKnown RBP19.44■□□□□ 0.7
DDX39A-214ENST00000590556 MAML1Q92585 1016 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 PBKQ96KB5 322 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 EXOC2Q96KP1 924 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 PSKH2Q96QS6 385 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 WDR24Q96S15 920 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 HEPHQ9BQS7 1158 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 TPSD1Q9BZJ3 242 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 IL36AQ9UHA7 158 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 PPM1HQ9ULR3 514 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 ZKSCAN5Q9Y2L8 839 aa19.44■□□□□ 0.7
DDX39A-214ENST00000590556 TCRBV7S2A1N4TA0A589 114 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 HACD1B0YJ81 288 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 H7C0C1 242 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 KCNK1O00180 336 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 KRIT1O00522 736 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 NEBLO76041 1014 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 POP4O95707 220 aaKnown RBP19.43■□□□□ 0.7
DDX39A-214ENST00000590556 ADH1BP00325 375 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 DNTTP04053 509 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 PRNPP04156 253 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 ACADMP11310 421 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 ATP5OP48047 213 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 EIF3EP60228 445 aaKnown RBP19.43■□□□□ 0.7
DDX39A-214ENST00000590556 ZBTB16Q05516 673 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 RAD51Q06609 339 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 PRKD1Q15139 912 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-214ENST00000590556 CST6Q15828 149 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 FAM46CQ5VWP2 391 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 TEX26Q8N6G2 289 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 OR6K2Q8NGY2 324 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 GRIN3AQ8TCU5 1115 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 NELL1Q92832 810 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 ZDHHC6Q9H6R6 413 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 NT5MQ9NPB1 228 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 RBM22Q9NW64 420 aaKnown RBP eCLIP19.43■□□□□ 0.7
DDX39A-214ENST00000590556 ZSCAN32Q9NX65 697 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 SEPT10Q9P0V9 454 aa19.43■□□□□ 0.7
DDX39A-214ENST00000590556 C1QTNF3-AMACRE9PGA6 284 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 H0Y858 1186 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 MUSKO15146 869 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 MID1O15344 667 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 JCHAINP01591 159 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 CTSLP07711 333 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 C7P10643 843 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 SLC8A1P32418 973 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 IFI35P80217 286 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-214ENST00000590556 NSUN2Q08J23 767 aaKnown RBP eCLIP19.42■□□□□ 0.7
DDX39A-214ENST00000590556 SLC45A4Q5BKX6 768 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 ARSIQ5FYB1 569 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 ADAT2Q7Z6V5 191 aaKnown RBP19.42■□□□□ 0.7
DDX39A-214ENST00000590556 SRLQ86TD4 932 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 TMIEQ8NEW7 156 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 PRSS33Q8NF86 280 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 PIP4K2CQ8TBX8 421 aa19.42■□□□□ 0.7
DDX39A-214ENST00000590556 QKIQ96PU8 341 aaKnown RBP eCLIP19.42■□□□□ 0.7
DDX39A-214ENST00000590556 OSBPL9Q96SU4 736 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms