RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 FEM1CQ96JP0 617 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 RETREG1Q9H6L5 497 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 CAAP1Q9H8G2 361 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 NLRC4Q9NPP4 1024 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 FAM207AQ9NSI2 230 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 HPCAL4Q9UM19 191 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 ZFR2Q9UPR6 939 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 FCF1Q9Y324 198 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 WASF2Q9Y6W5 498 aa18.29■□□□□ 0.52
PRKCSH-211ENST00000590098 FASNP49327 2511 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 TRIM38O00635 465 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 CYP1A1P04798 512 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 ADRB3P13945 408 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 RHOQP17081 205 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 ACP1P24666 158 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 L1CAMP32004 1257 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 SOX5P35711 763 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 KLK7P49862 253 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 GEMIN4P57678 1058 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 CLDN2P57739 230 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 FMO1Q01740 532 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 NRG1Q02297 640 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 KRT31Q15323 416 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 C15orf59Q2T9L4 293 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 CCDC14Q49A88 953 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 TMEM259Q4ZIN3 620 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 KIAA1161Q6NSJ0 714 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 DCP2Q8IU60 420 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 RYBPQ8N488 228 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 SLC30A5Q8TAD4 765 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 C11orf70Q9BRQ4 267 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 SLC17A9Q9BYT1 436 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 OSBPL2Q9H1P3 480 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 ZDHHC6Q9H6R6 413 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 HECAQ9UBI9 543 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 DAAM1Q9Y4D1 1078 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 CHD5Q8TDI0 1954 aa18.28■□□□□ 0.52
PRKCSH-211ENST00000590098 A0A087WV48 116 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 CXorf51AA0A1B0GTR3 108 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 A6NNZ2 444 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 ALPPL2P10696 532 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 CHRNB2P17787 502 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 ACVRL1P37023 503 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 STAT1P42224 750 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 MAPKAPK2P49137 400 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 E2F1Q01094 437 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 POLD3Q15054 466 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 SOWAHCQ53LP3 525 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 RAB6CQ53S08 254 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 CDKAL1Q5VV42 579 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 GCNT7Q6ZNI0 430 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 Q6ZSR6 202 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 STRADAQ7RTN6 431 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 ABI3BPQ7Z7G0 1075 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 PLPP6Q8IY26 295 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 OR4C6Q8NH72 309 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 ISG20Q96AZ6 181 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 IFT43Q96FT9 208 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 PCMTD1Q96MG8 357 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 DCBLD2Q96PD2 775 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 TM6SF2Q9BZW4 377 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 NRSN2Q9GZP1 204 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 RAB6CQ9H0N0 254 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 UCKL1Q9NWZ5 548 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 DNAI1Q9UI46 699 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 FADS3Q9Y5Q0 445 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 HS3ST3A1Q9Y663 406 aa18.27■□□□□ 0.52
PRKCSH-211ENST00000590098 LOC400499M0QZD8 3231 aa18.27■□□□□ 0.51
PRKCSH-211ENST00000590098 ASXL3Q9C0F0 2248 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 NEMP2A6NFY4 417 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 C2CD4BA6NLJ0 364 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 FFAR2O15552 330 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 AP1G1O43747 822 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 PIAS2O75928 621 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 PAK4O96013 591 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 PLEKP08567 350 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 KRT3P12035 628 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 PTPN9P43378 593 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 NSFP46459 744 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 JAM2P57087 298 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 SEMG2Q02383 582 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 SGCGQ13326 291 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 SYCP1Q15431 976 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 PTAR1Q7Z6K3 402 aaPredicted RBP18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 CACTIN-AS1Q8N1I8 211 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 ANKRD20A12PQ8NF67 263 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 JOSD2Q8TAC2 188 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 GPT2Q8TD30 523 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 FAM172AQ8WUF8 416 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 ARHGEF2Q92974 986 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 TBC1D31Q96DN5 1066 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 CRELD1Q96HD1 420 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 MAGEH1Q9H213 219 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 TMEM248Q9NWD8 314 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 DNAJC28Q9NX36 388 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 ADAM22Q9P0K1 906 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 CLCA2Q9UQC9 943 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 ACTL7AQ9Y615 435 aa18.26■□□□□ 0.51
PRKCSH-211ENST00000590098 NEMP1O14524 444 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms