RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 GBP2P32456 591 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 FDFT1P37268 417 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 ADCY8P40145 1251 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 EIF2DP41214 584 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 GARSP41250 739 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 GATA4P43694 442 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 KCNQ1P51787 676 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 CDR1P51861 262 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 DYNLT1P63172 113 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 PITX1P78337 314 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 RBM10P98175 930 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 CYP4F8P98187 520 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 OTUD4Q01804 1114 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 PFKPQ01813 784 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 IL10RBQ08334 325 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 PPIDQ08752 370 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 PTK6Q13882 451 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 HNRNPDQ14103 355 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 GRM3Q14832 879 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 BRD3Q15059 726 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 PCSK7Q16549 785 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 INO80DQ53TQ3 878 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 RAP1GAP2Q684P5 730 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 TXNRD3NBQ6F5E7 133 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 WDR93Q6P2C0 686 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 ARHGEF18Q6ZSZ5 1173 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 EP400NLQ6ZTU2 488 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 HOOK3Q86VS8 718 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 KLHL7Q8IXQ5 586 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 CCDC13Q8IYE1 715 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 ALLCQ8N6M5 410 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 PQLC3Q8N755 202 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 FIBINQ8TAL6 211 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 OSCP1Q8WVF1 389 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 HTR3CQ8WXA8 447 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 RTP4Q96DX8 246 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 QKIQ96PU8 341 aaKnown RBP eCLIP7.48□□□□□ -1.216e-6■■■■□ 23.1
SMAD4-210ENST00000590061 SRPK1Q96SB4 655 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 CYP2S1Q96SQ9 504 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 S1PR5Q9H228 398 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 SP110Q9HB58 689 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 TRPV5Q9NQA5 729 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 GKN1Q9NS71 199 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 RBM12Q9NTZ6 932 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 DUS2Q9NX74 493 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 DTLQ9NZJ0 730 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 WHRNQ9P202 907 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 ASIC3Q9UHC3 531 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 NUDT5Q9UKK9 219 aa7.48□□□□□ -1.21
SMAD4-210ENST00000590061 AAR2Q9Y312 384 aaKnown RBP7.48□□□□□ -1.21
SMAD4-210ENST00000590061 A0A1W2PQ67 120 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 E7EVH7 732 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 RFXAPO00287 272 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MATN3O15232 486 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 HOXC11O43248 304 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CTIFO43310 598 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MOSPD3O75425 235 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 GLP2RO95838 553 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ASLP04424 464 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CD48P09326 243 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 IRF1P10914 325 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 LAMP2P13473 410 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 FOSL2P15408 326 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 TCF4P15884 667 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CEBPBP17676 345 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 TNFRSF8P28908 595 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 PGFP49763 221 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 PLK1P53350 603 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ATXN1P54253 815 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 IFI35P80217 286 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 GNA12Q03113 381 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 FCHO2Q0JRZ9 810 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 AP1B1Q10567 949 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ILF2Q12905 390 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 SLMAPQ14BN4 828 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MORF4L2Q15014 288 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 EIF4HQ15056 248 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 PRKD1Q15139 912 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 OASLQ15646 514 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 SLC14A2Q15849 920 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ZNF77Q15935 545 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CA9Q16790 459 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 PARP6Q2NL67 630 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 FAM133BQ5BKY9 247 aaKnown RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 FAM78AQ5JUQ0 283 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 TEX35Q5T0J7 233 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MARC1Q5VT66 337 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 RNF219Q5W0B1 726 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 AFMIDQ63HM1 303 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 NCBP2-AS2Q69YL0 99 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 GET4Q7L5D6 327 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 CROCCP2Q86T23 111 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 LINC00523Q86TU6 105 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 NLRP14Q86W24 1093 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ZNF354CQ86Y25 554 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 MFN1Q8IWA4 741 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ZNF683Q8IZ20 524 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 ZDHHC14Q8IZN3 488 aa7.47□□□□□ -1.21
SMAD4-210ENST00000590061 C12orf76Q8N812 135 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-210ENST00000590061 KDM1BQ8NB78 822 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms