RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ITGB6P18564 788 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 DDX6P26196 483 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 GNA11P29992 359 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 RPL9P32969 192 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 GRIN1Q05586 938 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 MYBPC2Q14324 1141 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 EPHA7Q15375 998 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 NPY5RQ15761 445 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 CAMK4Q16566 473 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 LINC00303Q3SY05 128 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 SYCP2LQ5T4T6 812 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 DCAF12L1Q5VU92 463 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 BROXQ5VW32 411 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 KIAA1324Q6UXG2 1013 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 OTUD6AQ7L8S5 288 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 LRRTM3Q86VH5 581 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 ZC3H7AQ8IWR0 971 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 PHOSPHO1Q8TCT1 267 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 BICD2Q8TD16 824 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 FNIP1Q8TF40 1166 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 KCNE4Q8WWG9 221 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 MRPS31Q92665 395 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 FBXW5Q969U6 566 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 TOE1Q96GM8 510 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 GORASP1Q9BQQ3 440 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 STARD5Q9NSY2 213 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 GCNT4Q9P109 453 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 EIF2B4Q9UI10 523 aaKnown RBP8.19□□□□□ -1.1
SMAD4-209ENST00000589941 STK36Q9NRP7 1315 aa8.19□□□□□ -1.1
SMAD4-209ENST00000589941 TCRBV16S1A1N1A0A5B0 115 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 AMY2AP04746 511 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 HAPLN1P10915 354 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 HARSP12081 509 aaKnown RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 AMY2BP19961 511 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 MARCKSP29966 332 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CCT8P50990 548 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 AFF3P51826 1226 aaKnown RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 UCNP55089 124 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 DHCR24Q15392 516 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF568Q3ZCX4 644 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 ADALQ6DHV7 355 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 ABHD17CQ6PCB6 329 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC73Q6ZRK6 1079 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 STK32CQ86UX6 486 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CACUL1Q86Y37 369 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CEP57L1Q8IYX8 460 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CCAR2Q8N163 923 aaKnown RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC112Q8NEF3 446 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF397Q8NF99 534 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 IPO4Q8TEX9 1081 aaKnown RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC12Q8WUD4 166 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 MRGPRX1Q96LB2 322 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 MAGEB10Q96LZ2 347 aaPredicted RBP8.18□□□□□ -1.1
SMAD4-209ENST00000589941 USP28Q96RU2 1077 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 CD244Q9BZW8 370 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 TRIM9Q9C026 710 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 ZCWPW1Q9H0M4 648 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 TMEM206Q9H813 350 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 TMLHEQ9NVH6 421 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 DTLQ9NZJ0 730 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 DSEQ9UL01 958 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 COQ6Q9Y2Z9 468 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 PMF1-BGLAPU3KQ54 211 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 F8P00451 2351 aa8.18□□□□□ -1.1
SMAD4-209ENST00000589941 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 TRAV19A0A0A6YYK7 116 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC66A2RUB6 948 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 GOLGA6L19H0YKK7 550 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 H3BQV1 296 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 K7ENP7 123 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 IKBKBO14920 756 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 MAFKO60675 156 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF217O75362 1048 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 NAT1P18440 290 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 PDIA3P30101 505 aaKnown RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 CD6P30203 668 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 ATP2C1P98194 919 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 TAF12Q16514 161 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 VWA3BQ502W6 1294 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 C10orf76Q5T2E6 689 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 INO80CQ6PI98 192 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 RHBDF2Q6PJF5 856 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 IL27RAQ6UWB1 636 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 USP37Q86T82 979 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 OSTM1Q86WC4 334 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 ELOA2Q8IYF1 753 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC150Q8NCX0 1101 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 CNDP2Q96KP4 475 aaKnown RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 TIGD1Q96MW7 591 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 EIF2AK1Q9BQI3 630 aaKnown RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 C2orf40Q9H1Z8 148 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 ZNF768Q9H5H4 540 aaKnown RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 PTPRHQ9HD43 1115 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 TOPORSQ9NS56 1045 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 CATSPERZQ9NTU4 200 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 ANKEF1Q9NU02 776 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 FANCLQ9NW38 375 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms