RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 AGAP3Q96P47 875 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 NT5MQ9NPB1 228 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 KLHL8Q9P2G9 620 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 SUN2Q9UH99 717 aa15.43■□□□□ 0.06
ATG4D-211ENST00000589753 FEZ2Q9UHY8 353 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-211ENST00000589753 EDDM13A0A1B0GTR0 161 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 C5orf60A6NFR6 353 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 WASH3PC4AMC7 463 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ZNF821O75541 412 aaPredicted RBP15.42■□□□□ 0.06
ATG4D-211ENST00000589753 GSRP00390 522 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 IFNB1P01574 187 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 HLA-DQB2P05538 268 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 EPHX1P07099 455 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 PRKCHP24723 683 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 WASP42768 502 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 NRLP54845 237 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ITKQ08881 620 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 HNRNPA1L2Q32P51 320 aaKnown RBP15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ANKRD20A2Q5SQ80 823 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ANKRD20A1Q5TYW2 823 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ANKRD20A3Q5VUR7 823 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 Q6ZVU0 165 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 PID1Q7Z2X4 250 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ZNF567Q8N184 647 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 PGBD5Q8N414 524 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 CNTD1Q8N815 330 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ZNF366Q8N895 744 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 CCDC89Q8N998 374 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 TXNDC5Q8NBS9 432 aaKnown RBP15.42■□□□□ 0.06
ATG4D-211ENST00000589753 RTP4Q96DX8 246 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ZNF419Q96HQ0 510 aaPredicted RBP15.42■□□□□ 0.06
ATG4D-211ENST00000589753 TEKT5Q96M29 485 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 GABRG3Q99928 467 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 MGME1Q9BQP7 344 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 TM6SF2Q9BZW4 377 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 TNKS2Q9H2K2 1166 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 L2HGDHQ9H9P8 463 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 LHX3Q9UBR4 397 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 TRHDEQ9UKU6 1024 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 ATP8A1Q9Y2Q0 1164 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 SIT1Q9Y3P8 196 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 TTLL3Q9Y4R7 772 aa15.42■□□□□ 0.06
ATG4D-211ENST00000589753 CTAGE15A4D2H0 777 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 TMEM221A6NGB7 291 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 M0R296 226 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 MUSKO15146 869 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 ZBTB24O43167 697 aaPredicted RBP15.41■□□□□ 0.06
ATG4D-211ENST00000589753 BNIP3LO60238 219 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 GCATO75600 419 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 IGSF6O95976 241 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 CTAGE8P0CG41 777 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 ACTN2P35609 894 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 RECQLP46063 649 aaPredicted RBP15.41■□□□□ 0.06
ATG4D-211ENST00000589753 MAXP61244 160 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 SNRPD1P62314 119 aaKnown RBP15.41■□□□□ 0.06
ATG4D-211ENST00000589753 NSUN2Q08J23 767 aaKnown RBP eCLIP15.41■□□□□ 0.06
ATG4D-211ENST00000589753 P3H1Q32P28 736 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 CARD16Q5EG05 197 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 EOGTQ5NDL2 527 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 FAM182AQ5T1J6 154 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 ATXN7L2Q5T6C5 722 aaPredicted RBP15.41■□□□□ 0.06
ATG4D-211ENST00000589753 ITPRIPL1Q6GPH6 555 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 Q6ZS52 159 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 CTAGE6Q86UF2 777 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 CTAGE4Q8IX94 777 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 PLPP6Q8IY26 295 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 OR2AP1Q8NGE2 309 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 CCDC110Q8TBZ0 833 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 PTPRN2Q92932 1015 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 CLDN23Q96B33 292 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 EXOC2Q96KP1 924 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 GDAP1L1Q96MZ0 367 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 SPATA13Q96N96 652 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 KRT12Q99456 494 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 POLR1EQ9GZS1 481 aaKnown RBP15.41■□□□□ 0.06
ATG4D-211ENST00000589753 MTG2Q9H4K7 406 aa15.41■□□□□ 0.06
ATG4D-211ENST00000589753 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 CHURC1-FNTBB4DL54 471 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 SYNCRIPO60506 623 aaKnown RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 OPHN1O60890 802 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 ADAM23O75077 832 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 ATG13O75143 517 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 ECEL1O95672 775 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 GAS8O95995 478 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 PDGFBP01127 241 aaPredicted RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 HOXB2P14652 356 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 ETS1P14921 441 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 RPS9P46781 194 aaKnown RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 RGRP47804 291 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 CSNK1DP48730 415 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 SCNN1BP51168 640 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 STARD3Q14849 445 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 C9orf64Q5T6V5 341 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 CWF19L1Q69YN2 538 aaKnown RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 ARHGEF18Q6ZSZ5 1173 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 RYBPQ8N488 228 aaPredicted RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 OR2A12Q8NGT7 310 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms