RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 KLC2Q9H0B6 622 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 MIR1-1HGQ9H1L0 117 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 PDFQ9HBH1 243 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 FSCN3Q9NQT6 498 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 ABHD10Q9NUJ1 306 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 DMTF1Q9Y222 760 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 FCF1Q9Y324 198 aaKnown RBP10.69□□□□□ -0.7
TPM4-209ENST00000588483 PCDHGB2Q9Y5G2 931 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 ASPMQ8IZT6 3477 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 DOCK9Q9BZ29 2069 aa10.69□□□□□ -0.7
TPM4-209ENST00000588483 TPRP12270 2363 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 CEP295Q9C0D2 2601 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 A0A1W2PR77 199 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 RASA4BC9J798 803 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 RNF103O00237 685 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 VILLO15195 856 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 RASA4O43374 803 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 AP1G1O43747 822 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 LEFTY1O75610 366 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 CD59P13987 128 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 IL1R2P27930 398 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 CTSKP43235 329 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 CSNK1EP49674 416 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 PPP2CBP62714 309 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 PPP2CAP67775 309 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 SLC25A11Q02978 314 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 TBX2Q13207 712 aaPredicted RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 HNRNPDQ14103 355 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 TEAD4Q15561 434 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 ZNF423Q2M1K9 1284 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 CCDC122Q5T0U0 273 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 ERN2Q76MJ5 926 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 ZSCAN30Q86W11 494 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 FAM71BQ8TC56 605 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 ARRDC3Q96B67 414 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 ARHGEF26Q96DR7 871 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 HMCESQ96FZ2 354 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 NUP85Q9BW27 656 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 GTPBP2Q9BX10 602 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 TNKS2Q9H2K2 1166 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 DHX35Q9H5Z1 703 aaKnown RBP10.68□□□□□ -0.7
TPM4-209ENST00000588483 GPATCH2LQ9NWQ4 482 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 UVRAGQ9P2Y5 699 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 PCSK1NQ9UHG2 260 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 IP6K2Q9UHH9 426 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 LCMT1Q9UIC8 334 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 MFHAS1Q9Y4C4 1052 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 ACTL7AQ9Y615 435 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 TMEM131Q92545 1883 aa10.68□□□□□ -0.7
TPM4-209ENST00000588483 ACACBO00763 2458 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TRPM6Q9BX84 2022 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3DA0A087WVF3 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3IA0A087WXS9 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3EA0A087X179 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3KA0A087X1G2 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 A0A1B0GVT2 93 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3FA6NER0 549 aaPredicted RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 FAM47DPA6NHR8 397 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3LB9A6J9 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 EEF2KO00418 725 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 PLK4O00444 970 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 KPNA3O00505 521 aaPredicted RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 BNIP3LO60238 219 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 DFNA5O60443 496 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 PRAMEF11O60813 436 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 RNGTTO60942 597 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 TMCC1O94876 653 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 POP4O95707 220 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 TPM1P09493 284 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3HP0C7X1 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TCF4P15884 667 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 ERCC2P18074 760 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 NOVA1P51513 510 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 NEK3P51956 506 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 SNRPD1P62314 119 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 OVGP1Q12889 678 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 KIF19Q2TAC6 998 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 HLA-BQ31612 363 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3GQ6DHY5 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3CQ6IPX1 549 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 NAPEPLDQ6IQ20 393 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 POLNQ7Z5Q5 900 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 IQCHQ86VS3 1027 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 CNGA4Q8IV77 575 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 ARHGAP12Q8IWW6 846 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TBC1D3Q8IZP1 549 aaPredicted RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 LZTR1Q8N653 840 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 RNF214Q8ND24 703 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 GRIN3AQ8TCU5 1115 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 TSC1Q92574 1164 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 GAREM1Q9H706 876 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 ZWILCHQ9H900 591 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 DYRK4Q9NR20 520 aa10.67□□□□□ -0.7
TPM4-209ENST00000588483 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
TPM4-209ENST00000588483 RCOR3Q9P2K3 495 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms