RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 DCAF4L2Q8NA75 395 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 UCMAQ8WVF2 138 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF592Q92610 1267 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 MRGPRX1Q96LB2 322 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 HEMGNQ9BXL5 484 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 MKRN2Q9H000 416 aaKnown RBP16.43■□□□□ 0.22
ATG4D-205ENST00000586477 ABCB8Q9NUT2 735 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 VPS28Q9UK41 221 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 HEY1Q9Y5J3 304 aa16.43■□□□□ 0.22
ATG4D-205ENST00000586477 NUMA1Q14980 2115 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 IGHV1OR15-9A0A0B4J2B8 117 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 SLC30A4O14863 429 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 FGGP02679 453 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 ASLP04424 464 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 IRAK1P51617 712 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 CREB5Q02930 508 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 CKAP4Q07065 602 aaKnown RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 KLF1Q13351 362 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 XRCC4Q13426 336 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 PTPRNQ16849 979 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 DNTTIP2Q5QJE6 756 aaKnown RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 ARTNQ5T4W7 220 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 IL31Q6EBC2 164 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 TIGD7Q6NT04 549 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 RETSATQ6NUM9 610 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 C11orf74Q86VG3 221 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 ATPAF2Q8N5M1 289 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 C12orf50Q8NA57 414 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 CYB5D2Q8WUJ1 264 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 NSMCE1Q8WV22 266 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 FEM1AQ9BSK4 669 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 CIPCQ9C0C6 399 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 LRRC19Q9H756 370 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 ATP13A1Q9HD20 1204 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 VPS45Q9NRW7 570 aa16.42■□□□□ 0.22
ATG4D-205ENST00000586477 INTS6Q9UL03 887 aaKnown RBP16.42■□□□□ 0.22
ATG4D-205ENST00000586477 HACD1B0YJ81 288 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 PATE3B3GLJ2 98 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 RASA4BC9J798 803 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 MCF2LO15068 1137 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 NPC1O15118 1278 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 MTSS1O43312 755 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 RASA4O43374 803 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 HLA-EP13747 358 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
ATG4D-205ENST00000586477 NNMTP40261 264 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 CSKP41240 450 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 DHPSP49366 369 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-205ENST00000586477 COPAP53621 1224 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 SLC20A2Q08357 652 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 GALNT2Q10471 571 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 LMAN2Q12907 356 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 PLEKHG6Q3KR16 790 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 AASDHQ4L235 1098 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-205ENST00000586477 FSCBQ5H9T9 825 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 SDE2Q6IQ49 451 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 CASKIN2Q8WXE0 1202 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
ATG4D-205ENST00000586477 HDAC11Q96DB2 347 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 MYO19Q96H55 970 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 TMEM245Q9H330 911 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 SP110Q9HB58 689 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 TMEM74BQ9NUR3 256 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 DTLQ9NZJ0 730 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 SLC25A13Q9UJS0 675 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 ADAMTS9Q9P2N4 1935 aa16.41■□□□□ 0.22
ATG4D-205ENST00000586477 NYNRINQ9P2P1 1898 aaKnown RBP16.4■□□□□ 0.22
ATG4D-205ENST00000586477 DFFAO00273 331 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 MFSD11O43934 449 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 URI1O94763 535 aaPredicted RBP16.4■□□□□ 0.22
ATG4D-205ENST00000586477 GARSP41250 739 aaKnown RBP16.4■□□□□ 0.22
ATG4D-205ENST00000586477 SERINC3Q13530 473 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 NOMO1Q15155 1222 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 WHAMMP3Q1A5X7 153 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 MBLAC2Q68D91 279 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 ARMCX6Q7L4S7 300 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 CDKL3Q8IVW4 592 aaPredicted RBP16.4■□□□□ 0.22
ATG4D-205ENST00000586477 BBS5Q8N3I7 341 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 DEFB119Q8N690 84 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 NPWQ8N729 165 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF366Q8N895 744 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 FATE1Q969F0 183 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 SPACA7Q96KW9 195 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 ZNF599Q96NL3 588 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 SPON2Q9BUD6 331 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 ACE2Q9BYF1 805 aaPredicted RBP16.4■□□□□ 0.22
ATG4D-205ENST00000586477 ETNK2Q9NVF9 386 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 CYP8B1Q9UNU6 501 aa16.4■□□□□ 0.22
ATG4D-205ENST00000586477 PCDH15Q96QU1 1955 aa16.39■□□□□ 0.21
ATG4D-205ENST00000586477 TM4SF5O14894 197 aa16.39■□□□□ 0.21
ATG4D-205ENST00000586477 KDELR3O43731 214 aa16.39■□□□□ 0.21
ATG4D-205ENST00000586477 STK10O94804 968 aaKnown RBP16.39■□□□□ 0.21
ATG4D-205ENST00000586477 C7P10643 843 aa16.39■□□□□ 0.21
ATG4D-205ENST00000586477 CCNCP24863 283 aa16.39■□□□□ 0.21
ATG4D-205ENST00000586477 LIMK1P53667 647 aa16.39■□□□□ 0.21
ATG4D-205ENST00000586477 ST8SIA6P61647 398 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms