RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 HMGB4Q8WW32 186 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 ISG20Q96AZ6 181 aaKnown RBP13.32□□□□□ -0.28
DNMT1-205ENST00000585920 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 TSGA13Q96PP4 275 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 BRD8Q9H0E9 1235 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 CARD9Q9H257 536 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 TNKS2Q9H2K2 1166 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 FBRSQ9HAH7 460 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 PDFQ9HBH1 243 aa13.32□□□□□ -0.28
DNMT1-205ENST00000585920 SAE1Q9UBE0 346 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-205ENST00000585920 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 HOXA6P31267 233 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 PXNP49023 591 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 RHOAP61586 193 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 SNRPD1P62314 119 aaKnown RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 AP1B1Q10567 949 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 LBRQ14739 615 aaKnown RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 CARD16Q5EG05 197 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 MARC1Q5VT66 337 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 DCAF12L1Q5VU92 463 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 HEATR6Q6AI08 1181 aaKnown RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 C22orf39Q6P5X5 142 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 DSG4Q86SJ6 1040 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 CCDC13Q8IYE1 715 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 STK40Q8N2I9 435 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 BBS5Q8N3I7 341 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 C17orf53Q8N3J3 647 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 OR8D1Q8WZ84 308 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 PRCCQ92733 491 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 FAM129BQ96TA1 746 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 LGMNQ99538 433 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 CINPQ9BW66 212 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 TM6SF2Q9BZW4 377 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 CD248Q9HCU0 757 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 HECAQ9UBI9 543 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-205ENST00000585920 SEPT3Q9UH03 358 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 EBF1Q9UH73 591 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
DNMT1-205ENST00000585920 APOC4-APOC2K7ER74 178 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 MCF2LO15068 1137 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 AXIN1O15169 862 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 MATN3O15232 486 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 CEP104O60308 925 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ZNF821O75541 412 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 NEBLO76041 1014 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 APOC2P02655 101 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 SP9P0CG40 484 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ACADMP11310 421 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 PECAM1P16284 738 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 GABRG2P18507 467 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 FNTBP49356 437 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 RENBPP51606 427 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 COPAP53621 1224 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 LSM11P83369 360 aaKnown RBP eCLIP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 SLC10A7Q0GE19 358 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 HNRNPDQ14103 355 aaKnown RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ELAVL3Q14576 367 aaKnown RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ZNF235Q14590 738 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 LCE2DQ5TA82 110 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ZNF776Q68DI1 518 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 ADGRD1Q6QNK2 874 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 KIAA1324Q6UXG2 1013 aaKnown RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 DPY19L3Q6ZPD9 716 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 RASSF3Q86WH2 238 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 OR2AP1Q8NGE2 309 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 OR2A12Q8NGT7 310 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 LRRN4Q8WUT4 740 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 HDAC11Q96DB2 347 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 SIPA1Q96FS4 1042 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 MRGPRX1Q96LB2 322 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 HERPUD2Q9BSE4 406 aa13.3□□□□□ -0.28
DNMT1-205ENST00000585920 FAM126AQ9BYI3 521 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 MKRN2Q9H000 416 aaKnown RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 RSPH9Q9H1X1 276 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-205ENST00000585920 CUL9Q8IWT3 2517 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 H7C0C1 242 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 ALOX15BO15296 676 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 POP4O95707 220 aaKnown RBP13.29□□□□□ -0.28
DNMT1-205ENST00000585920 IGSF6O95976 241 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 PEX11BO96011 259 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 GSRP00390 522 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 IL1BP01584 269 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 DNTTP04053 509 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 ATP1A1P05023 1023 aaKnown RBP13.29□□□□□ -0.28
DNMT1-205ENST00000585920 CCNB1P14635 433 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 CHRNA3P32297 505 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 CXCR5P32302 372 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 ATP5OP48047 213 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 RPS14P62263 151 aaKnown RBP13.29□□□□□ -0.28
DNMT1-205ENST00000585920 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
DNMT1-205ENST00000585920 ZBTB16Q05516 673 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 RAD51Q06609 339 aa13.29□□□□□ -0.28
DNMT1-205ENST00000585920 PPIDQ08752 370 aaKnown RBP13.29□□□□□ -0.28
DNMT1-205ENST00000585920 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms