RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 PIGHQ14442 188 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 TRIP6Q15654 476 aaKnown RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 SMTNL2Q2TAL5 461 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 PPP6R3Q5H9R7 873 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 NCEH1Q6PIU2 408 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 ZNF354CQ86Y25 554 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 CHCHD4Q8N4Q1 142 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 NIPA2Q8N8Q9 360 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 SETD7Q8WTS6 366 aaKnown RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 BIRC7Q96CA5 298 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 HMCESQ96FZ2 354 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 ZWILCHQ9H900 591 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 NHEJ1Q9H9Q4 299 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 SPTLC3Q9NUV7 552 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 HPCAL4Q9UM19 191 aa21.15■□□□□ 0.98
TOP3A-218ENST00000584669 FNDC3AQ9Y2H6 1198 aaKnown RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-218ENST00000584669 EIF3CLB5ME19 914 aaKnown RBP21.14■□□□□ 0.97
TOP3A-218ENST00000584669 RASA4BC9J798 803 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 C1QTNF3-AMACRE9PGA6 284 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 RASA4O43374 803 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 CHRNA3P32297 505 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 HTR7P34969 479 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 DNA2P51530 1060 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 ADPRHP54922 357 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 BNC1Q01954 994 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 SFSWAPQ12872 951 aaKnown RBP21.14■□□□□ 0.97
TOP3A-218ENST00000584669 TEAD4Q15561 434 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 ZNF423Q2M1K9 1284 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 HLA-BQ31612 363 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 KCNT1Q5JUK3 1230 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 FAM46CQ5VWP2 391 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 KIAA0895LQ68EN5 471 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 TXNRD3NBQ6F5E7 133 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 IL27RAQ6UWB1 636 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 DPY19L3Q6ZPD9 716 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 CPNE8Q86YQ8 564 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 CNGA4Q8IV77 575 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 UMODL1-AS1Q8N2C9 162 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 ZNF564Q8TBZ8 553 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-218ENST00000584669 CCDC114Q96M63 670 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 EIF3CQ99613 913 aaKnown RBP21.14■□□□□ 0.97
TOP3A-218ENST00000584669 NCAPGQ9BPX3 1015 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 CEP44Q9C0F1 390 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 ZMIZ1Q9ULJ6 1067 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 FARP1Q9Y4F1 1045 aaPredicted RBP21.14■□□□□ 0.97
TOP3A-218ENST00000584669 NEUROG3Q9Y4Z2 214 aa21.14■□□□□ 0.97
TOP3A-218ENST00000584669 CABIN1Q9Y6J0 2220 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 TRPM6Q9BX84 2022 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 TRIM16O95361 564 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 IGHV4-34P06331 123 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 H2AFZP0C0S5 128 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 RECQLP46063 649 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 AFF3P51826 1226 aaKnown RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 YBEYP58557 167 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 CNTN1Q12860 1018 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 LAYNQ6UX15 382 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 RFX8Q6ZV50 586 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 H2AFVQ71UI9 128 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 PSTKQ8IV42 348 aaKnown RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 PCDH20Q8N6Y1 951 aaKnown RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 NETO2Q8NC67 525 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 OR14C36Q8NHC7 312 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 C1orf216Q8TAB5 229 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 GRIN3AQ8TCU5 1115 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 HSPH1Q92598 858 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 GATA6Q92908 595 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 CELF6Q96J87 481 aaKnown RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 CCDC42Q96M95 316 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 TM6SF2Q9BZW4 377 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 TM7SF3Q9NS93 570 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 CWC15Q9P013 229 aaKnown RBP21.13■□□□□ 0.97
TOP3A-218ENST00000584669 CTTNBP2NLQ9P2B4 639 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 IL36AQ9UHA7 158 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 FRYQ5TBA9 3013 aa21.13■□□□□ 0.97
TOP3A-218ENST00000584669 MYO1FO00160 1098 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 DAPK3O43293 454 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 BUB1O43683 1085 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 RARAP10276 462 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 ERCC2P18074 760 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 ZNF75DP51815 510 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 SLC25A11Q02978 314 aaKnown RBP21.12■□□□□ 0.97
TOP3A-218ENST00000584669 SERINC3Q13530 473 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 PARP15Q460N3 678 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 CARD16Q5EG05 197 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 ARSIQ5FYB1 569 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 ADAT2Q7Z6V5 191 aaKnown RBP21.12■□□□□ 0.97
TOP3A-218ENST00000584669 TC2NQ8N9U0 490 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 OR2T34Q8NGX1 318 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 CTNNBL1Q8WYA6 563 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-218ENST00000584669 ZCCHC14Q8WYQ9 949 aaKnown RBP21.12■□□□□ 0.97
TOP3A-218ENST00000584669 FAM131CQ96AQ9 280 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 ARRDC3Q96B67 414 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 TMEM121BQ9BXQ6 578 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-218ENST00000584669 LRRC19Q9H756 370 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 TM9SF3Q9HD45 589 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 WASF2Q9Y6W5 498 aa21.12■□□□□ 0.97
TOP3A-218ENST00000584669 CXorf51AA0A1B0GTR3 108 aa21.11■□□□□ 0.97
TOP3A-218ENST00000584669 LRRC72A6NJI9 287 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms