RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 TM6SF2Q9BZW4 377 aa15.35■□□□□ 0.05
MKS1-210ENST00000581180 MKRN2Q9H000 416 aaKnown RBP15.35■□□□□ 0.05
MKS1-210ENST00000581180 RSPH9Q9H1X1 276 aaPredicted RBP15.35■□□□□ 0.05
MKS1-210ENST00000581180 FBRSQ9HAH7 460 aa15.35■□□□□ 0.05
MKS1-210ENST00000581180 SEPT3Q9UH03 358 aa15.35■□□□□ 0.05
MKS1-210ENST00000581180 TTC7AQ9ULT0 858 aaPredicted RBP15.35■□□□□ 0.05
MKS1-210ENST00000581180 R3HDM2Q9Y2K5 976 aaKnown RBP15.35■□□□□ 0.05
MKS1-210ENST00000581180 DOCK9Q9BZ29 2069 aa15.35■□□□□ 0.05
MKS1-210ENST00000581180 HACD1B0YJ81 288 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 MCF2LO15068 1137 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 MUSKO15146 869 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 ALOX15BO15296 676 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 APBB3O95704 486 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 FGGP02679 453 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 GABRG2P18507 467 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 RGRP47804 291 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 RHOAP61586 193 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 IFI35P80217 286 aaPredicted RBP15.34■□□□□ 0.05
MKS1-210ENST00000581180 AP1B1Q10567 949 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 MARC1Q5VT66 337 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 B4GALNT4Q76KP1 1039 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 PGBD5Q8N414 524 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 CHST14Q8NCH0 376 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 OR2AP1Q8NGE2 309 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 SLC35B2Q8TB61 432 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 NSMCE1Q8WV22 266 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 TFB1MQ8WVM0 346 aaKnown RBP15.34■□□□□ 0.05
MKS1-210ENST00000581180 MRGPRX1Q96LB2 322 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 FAM118BQ9BPY3 351 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 MGME1Q9BQP7 344 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 EBF1Q9UH73 591 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 FBXO4Q9UKT5 387 aa15.34■□□□□ 0.05
MKS1-210ENST00000581180 GON4LQ3T8J9 2241 aa15.33■□□□□ 0.05
MKS1-210ENST00000581180 CTAGE9A4FU28 777 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 KCNK1O00180 336 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 GALR2O43603 387 aaPredicted RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 CTSLP07711 333 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 RBP3P10745 1247 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CCNB1P14635 433 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 TCP1P17987 556 aaKnown RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 NDUFV2P19404 249 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CR2P20023 1033 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 HSPA9P38646 679 aaKnown RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 MMP13P45452 471 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CSNK1DP48730 415 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 RENBPP51606 427 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CCNHP51946 323 aaPredicted RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 EIF3EP60228 445 aaKnown RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 RPS14P62263 151 aaKnown RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 SNRPD1P62314 119 aaKnown RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 NSUN2Q08J23 767 aaKnown RBP eCLIP15.33■□□□□ 0.04
MKS1-210ENST00000581180 ZBTB17Q13105 803 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 SLC45A4Q5BKX6 768 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 ATXN7L2Q5T6C5 722 aaPredicted RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 TSSK4Q6SA08 328 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 ADAT2Q7Z6V5 191 aaKnown RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 MDGA1Q8NFP4 955 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 ACTRT1Q8TDG2 376 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 OR8D1Q8WZ84 308 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 NELL1Q92832 810 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 MS4A14Q96JA4 679 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CCDC114Q96M63 670 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 GDAP1L1Q96MZ0 367 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CINPQ9BW66 212 aaPredicted RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 SLC6A17Q9H1V8 727 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 RBM22Q9NW64 420 aaKnown RBP eCLIP15.33■□□□□ 0.04
MKS1-210ENST00000581180 HECAQ9UBI9 543 aaPredicted RBP15.33■□□□□ 0.04
MKS1-210ENST00000581180 AMACRQ9UHK6 382 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 PPM1HQ9ULR3 514 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 WASF2Q9Y6W5 498 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.04
MKS1-210ENST00000581180 CCDC163A0A0D9SF12 145 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 H7C0C1 242 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 RNF103O00237 685 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 ZNF185O15231 689 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 INSIG1O15503 277 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 BNIP3LO60238 219 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 ALDH1A2O94788 518 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 IGSF6O95976 241 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 JCHAINP01591 159 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 HLA-DQB2P05538 268 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 PTPN3P26045 913 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 RBL1P28749 1068 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 CHRNA3P32297 505 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 RECQLP46063 649 aaPredicted RBP15.32■□□□□ 0.04
MKS1-210ENST00000581180 ATP5OP48047 213 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 CSTF1Q05048 431 aaKnown RBP15.32■□□□□ 0.04
MKS1-210ENST00000581180 DMWDQ09019 674 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 WASHC5Q12768 1159 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 ZNF235Q14590 738 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 ANGPT1Q15389 498 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 MYLK3Q32MK0 819 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 ZNF776Q68DI1 518 aaPredicted RBP15.32■□□□□ 0.04
MKS1-210ENST00000581180 ALG1LQ6GMV1 187 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 ANO7Q6IWH7 933 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 SYT10Q6XYQ8 523 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 BBS5Q8N3I7 341 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 CNTD1Q8N815 330 aa15.32■□□□□ 0.04
MKS1-210ENST00000581180 HMGB4Q8WW32 186 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms