RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ALFQ53S48 1182 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 CERCAMQ5T4B2 595 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 RANBP10Q6VN20 620 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 KIAA0408Q6ZU52 694 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 STRA8Q7Z7C7 330 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 CCDC63Q8NA47 563 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 PEX13Q92968 403 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 USP13Q92995 863 aaPredicted RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 IGSF8Q969P0 613 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 FAM111AQ96PZ2 611 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 RBBP8Q99708 897 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 SLC13A1Q9BZW2 595 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 KIF9Q9HAQ2 790 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 SMYD2Q9NRG4 433 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 UBA2Q9UBT2 640 aaPredicted RBP11.29□□□□□ -0.6
SKA2-204ENST00000578519 PRKAG3Q9UGI9 489 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 TCAF1Q9Y4C2 921 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 INSL5Q9Y5Q6 135 aa11.29□□□□□ -0.6
SKA2-204ENST00000578519 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 H0YHG0 523 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 KDELR3O43731 214 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 USP12O75317 370 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 H2AFYO75367 372 aaKnown RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 STC2O76061 302 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 FGF18O76093 207 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 CXCL14O95715 111 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 FGF1P05230 155 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 ATP5BP06576 529 aaKnown RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 ERVK-10P10266 1014 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 COL6A2P12110 1019 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 ADRA1AP35348 466 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 SERPINB4P48594 390 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 KCNQ1P51787 676 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 LIMK2P53671 638 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 SLC12A2P55011 1212 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 CRADDP78560 199 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 DEFB103AP81534 67 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 ASPHQ12797 758 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 TAF1BQ53T94 588 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 RALGPS1Q5JS13 557 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 TEDDM1Q5T9Z0 273 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 KIAA0930Q6ICG6 404 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 PSRC1Q6PGN9 363 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 SH2D5Q6ZV89 423 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 TRPM8Q7Z2W7 1104 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 DENND1CQ8IV53 801 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 HJURPQ8NCD3 748 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 PHOSPHO2Q8TCD6 241 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 FEM1CQ96JP0 617 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 CINPQ9BW66 212 aaPredicted RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 TSSK1BQ9BXA7 367 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 VN1R3Q9BXE9 311 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 PLAC1Q9HBJ0 212 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 IARS2Q9NSE4 1012 aaKnown RBP11.28□□□□□ -0.6
SKA2-204ENST00000578519 DPP7Q9UHL4 492 aa11.28□□□□□ -0.6
SKA2-204ENST00000578519 ZCWPW2A0A1B0GU75 182 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 TRIM43BA6NCK2 446 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 SOBPA7XYQ1 873 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 PFDN6O15212 129 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 MT-CYBP00156 380 aaPredicted RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 OAS1P00973 400 aaKnown RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 TPH1P17752 444 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 HDCP19113 662 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 GRK2P25098 689 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 DDX6P26196 483 aaKnown RBP eCLIP11.27□□□□□ -0.61
SKA2-204ENST00000578519 CRABP2P29373 138 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 FOXN2P32314 431 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 CD86P42081 329 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 MAGEA9P43362 315 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 FPGSQ05932 587 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 CDK18Q07002 472 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 CCDC15Q0P6D6 951 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 BMPR2Q13873 1038 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 SEPT6Q14141 434 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 ZKSCAN8Q15776 578 aaPredicted RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 HSP90AA5PQ58FG0 334 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 NADSYN1Q6IA69 706 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 KDELC1Q6UW63 502 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 TMC7Q7Z402 723 aa11.27□□□□□ -0.61
SKA2-204ENST00000578519 ZNF557Q8N988 423 aaPredicted RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 SCG3Q8WXD2 468 aaKnown RBP11.27□□□□□ -0.61
SKA2-204ENST00000578519 SPOCK2Q92563 424 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms