RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 SLMAPQ14BN4 828 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 HIF1AQ16665 826 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 DNAJC21Q5F1R6 531 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 MBLAC2Q68D91 279 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CCNI2Q6ZMN8 369 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ZCCHC9Q8N567 271 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 KDM1BQ8NB78 822 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 MCUQ8NE86 351 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 HNRNPLLQ8WVV9 542 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CPT1BQ92523 772 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PRCCQ92733 491 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ISG20Q96AZ6 181 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 LMLNQ96KR4 655 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GDAP1L1Q96MZ0 367 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CEP41Q9BYV8 373 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NFU1Q9UMS0 254 aa13.5□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CDH23Q9H251 3354 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ARNTLO00327 626 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NPC1O15118 1278 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SNAP91O60641 907 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 AP2A1O95782 977 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 APODP05090 189 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SERPINF2P08697 491 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 MLNP12872 115 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GLULP15104 373 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GJA4P35212 333 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 AP1S1P61966 158 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NSUN2Q08J23 767 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ARMC3Q5W041 872 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CENPUQ71F23 418 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 APCDD1Q8J025 514 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PCDH20Q8N6Y1 951 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NAT16Q8N8M0 369 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NAT8LQ8N9F0 302 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ATP11CQ8NB49 1132 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 FBXO25Q8TCJ0 367 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 LRRN4Q8WUT4 740 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PLA2G2FQ9BZM2 168 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ARFGAP3Q9NP61 516 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ZDHHC18Q9NUE0 388 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 THEGQ9P2T0 379 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 FAM153AQ9UHL3 310 aa13.49□□□□□ -0.25
CDK5RAP3-205ENST00000577802 COL4A2P08572 1712 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 METTL18O95568 372 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GSRP00390 522 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 DLDP09622 509 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GLDCP23378 1020 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GRIA2P42262 883 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 RECQLP46063 649 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CSNK1DP48730 415 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SNRPD1P62314 119 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 KDSRQ06136 332 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 RAD51Q06609 339 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PRUNE1Q86TP1 453 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 RALGPS2Q86X27 583 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 KLHDC8BQ8IXV7 354 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CNTD1Q8N815 330 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 LRRC39Q96DD0 335 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 IMP4Q96G21 291 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 EPC1Q9H2F5 836 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 KCNK12Q9HB15 430 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 GTSE1Q9NYZ3 720 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CLEC4EQ9ULY5 219 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 PLA2G4CQ9UP65 541 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TICRRQ7Z2Z1 1910 aa13.48□□□□□ -0.25
CDK5RAP3-205ENST00000577802 INSIG1O15503 277 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SUN1O94901 812 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CISD3P0C7P0 127 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 H2AFXP16104 143 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ECHS1P30084 290 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 CD68P34810 354 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NRLP54845 237 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 NAA30Q147X3 362 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SPDYCQ5MJ68 293 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 FAXCQ5TGI0 409 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ZDHHC24Q6UX98 284 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 LINGO4Q6UY18 593 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 ADIPOR2Q86V24 386 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 C12orf40Q86WS4 652 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TAB3Q8N5C8 712 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 AENQ8WTP8 325 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 IFT43Q96FT9 208 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TTC25Q96NG3 672 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TUBGCP5Q96RT8 1024 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 SEMA3CQ99985 751 aa13.47□□□□□ -0.25
CDK5RAP3-205ENST00000577802 TBL1YQ9BQ87 522 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms