RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TCEAL6Q6IPX3 200 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 SLC23A3Q6PIS1 610 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 TMCO3Q6UWJ1 677 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 SPC24Q8NBT2 197 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 NETO2Q8NC67 525 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 OR2AP1Q8NGE2 309 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 TCEAL3Q969E4 200 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 BAG1Q99933 345 aaPredicted RBP19.66■□□□□ 0.74
SS18-208ENST00000577751 TM6SF2Q9BZW4 377 aa19.66■□□□□ 0.74
SS18-208ENST00000577751 LUC7LQ9NQ29 371 aaKnown RBP19.66■□□□□ 0.74
SS18-208ENST00000577751 HECAQ9UBI9 543 aaPredicted RBP19.66■□□□□ 0.74
SS18-208ENST00000577751 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.66■□□□□ 0.74
SS18-208ENST00000577751 ATXN2Q99700 1313 aaKnown RBP19.66■□□□□ 0.74
SS18-208ENST00000577751 PRR5-ARHGAP8B1AHC4 643 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 PLK4O00444 970 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 LEFTY1O75610 366 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 SLC1A1P43005 524 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 ADPRHP54922 357 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 ARHGAP8P85298 464 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 CNTN1Q12860 1018 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 MMRN1Q13201 1228 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 CYTH1Q15438 398 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 DUOXA1Q1HG43 343 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 AGBL4Q5VU57 503 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 NCEH1Q6PIU2 408 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.65■□□□□ 0.74
SS18-208ENST00000577751 TP53INP2Q8IXH6 220 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 RGL4Q8IZJ4 473 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 C12orf50Q8NA57 414 aaPredicted RBP19.65■□□□□ 0.74
SS18-208ENST00000577751 KCTD6Q8NC69 237 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 OR2T34Q8NGX1 318 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 C1orf216Q8TAB5 229 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 CEP76Q8TAP6 659 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 ARRDC3Q96B67 414 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 BIRC7Q96CA5 298 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 FAF2Q96CS3 445 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 LRIG1Q96JA1 1093 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 ZNF670Q9BS34 389 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 KDM4CQ9H3R0 1056 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 RXFP3Q9NSD7 469 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 UBA2Q9UBT2 640 aaPredicted RBP19.65■□□□□ 0.74
SS18-208ENST00000577751 TFR2Q9UP52 801 aa19.65■□□□□ 0.74
SS18-208ENST00000577751 REXO2Q9Y3B8 237 aaKnown RBP19.65■□□□□ 0.74
SS18-208ENST00000577751 RCCD1A6NED2 376 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 MEI4A8MW99 385 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 KPNA3O00505 521 aaPredicted RBP19.64■□□□□ 0.73
SS18-208ENST00000577751 PLRG1O43660 514 aaKnown RBP19.64■□□□□ 0.73
SS18-208ENST00000577751 IGHV4-34P06331 123 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 IRX4P78413 519 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 IL10RBQ08334 325 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 MYLK3Q32MK0 819 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 TRIM61Q5EBN2 209 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 LRRC38Q5VT99 294 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 KIAA0895LQ68EN5 471 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 ARHGAP36Q6ZRI8 547 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 RABEPKQ7Z6M1 372 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 MAP7D3Q8IWC1 876 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 OR14C36Q8NHC7 312 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 PCDH19Q8TAB3 1148 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 GRIN3AQ8TCU5 1115 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 ORAI3Q9BRQ5 295 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 LHX3Q9UBR4 397 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 SUSD2Q9UGT4 822 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 IPO11Q9UI26 975 aaKnown RBP19.64■□□□□ 0.73
SS18-208ENST00000577751 SLC6A14Q9UN76 642 aa19.64■□□□□ 0.73
SS18-208ENST00000577751 LNP1A1A4G5 178 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 LRRC72A6NJI9 287 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 DFFAO00273 331 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 GDF9O60383 454 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 POP4O95707 220 aaKnown RBP19.63■□□□□ 0.73
SS18-208ENST00000577751 SERPINF2P08697 491 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 KDELR1P24390 212 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 SERPINB6P35237 376 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 GJC1P36383 396 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 NOP2P46087 812 aaKnown RBP19.63■□□□□ 0.73
SS18-208ENST00000577751 TAS2R38P59533 333 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 POM121L1PQ3SYA9 428 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 ANKRD20A8PQ5CZ79 823 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 PIP5KL1Q5T9C9 394 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 RAPGEF5Q92565 580 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 GDAP1L1Q96MZ0 367 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 CALN1Q9BXU9 219 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 HDAC8Q9BY41 377 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 CAPN10Q9HC96 672 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 KLHL11Q9NVR0 708 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 EIF2B4Q9UI10 523 aaKnown RBP19.63■□□□□ 0.73
SS18-208ENST00000577751 SALL4Q9UJQ4 1053 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 PCDH15Q96QU1 1955 aa19.63■□□□□ 0.73
SS18-208ENST00000577751 FAM47DPA6NHR8 397 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 ZNF487B1APH4 448 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 BUB1BO60566 1050 aaPredicted RBP19.62■□□□□ 0.73
SS18-208ENST00000577751 FSBPO95073 299 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 GNSP15586 552 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 COMTP21964 271 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 ITGB7P26010 798 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 GKP32189 559 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 CCR5P51681 352 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 LIMK1P53667 647 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 RHOAP61586 193 aa19.62■□□□□ 0.73
SS18-208ENST00000577751 CCDC15Q0P6D6 951 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms