RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 MDGA1Q8NFP4 955 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 OR2AP1Q8NGE2 309 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 OR2A12Q8NGT7 310 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 LRRN4Q8WUT4 740 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MAIP1Q8WWC4 291 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MAML1Q92585 1016 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 PRCCQ92733 491 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 GDAP1L1Q96MZ0 367 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 PSKH2Q96QS6 385 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 WDR24Q96S15 920 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 PRRX2Q99811 253 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 MKRN2Q9H000 416 aaKnown RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 RSPH9Q9H1X1 276 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 HECAQ9UBI9 543 aaPredicted RBP14.21□□□□□ -0.13
RPAIN-217ENST00000575711 LHX3Q9UBR4 397 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 SNX12Q9UMY4 172 aa14.21□□□□□ -0.13
RPAIN-217ENST00000575711 ATG2BQ96BY7 2078 aa14.21□□□□□ -0.14
RPAIN-217ENST00000575711 NYNRINQ9P2P1 1898 aaKnown RBP14.21□□□□□ -0.14
RPAIN-217ENST00000575711 CTAGE9A4FU28 777 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 C1QTNF3-AMACRE9PGA6 284 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 FGGP02679 453 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 DNTTP04053 509 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 CCNB1P14635 433 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 TCP1P17987 556 aaKnown RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 CHRNA3P32297 505 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 PXNP49023 591 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 CCNHP51946 323 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 NRLP54845 237 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 EIF3EP60228 445 aaKnown RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 RAD51Q06609 339 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 PRKD1Q15139 912 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 LONRF2Q1L5Z9 754 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 ZNF528Q3MIS6 628 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 SLC45A4Q5BKX6 768 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 ATXN7L2Q5T6C5 722 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 ZNF776Q68DI1 518 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 KIAA1324Q6UXG2 1013 aaKnown RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 ADAT2Q7Z6V5 191 aaKnown RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 RASSF3Q86WH2 238 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 CACUL1Q86Y37 369 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 MMAAQ8IVH4 418 aaKnown RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 TEX26Q8N6G2 289 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 TSEN2Q8NCE0 465 aaKnown RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 SIPA1Q96FS4 1042 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 EXOC2Q96KP1 924 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 MRGPRX1Q96LB2 322 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 QKIQ96PU8 341 aaKnown RBP eCLIP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 OSBPL9Q96SU4 736 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 FAM129BQ96TA1 746 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 FERMT1Q9BQL6 677 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 HEPHQ9BQS7 1158 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 FAM126AQ9BYI3 521 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-217ENST00000575711 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 EBF1Q9UH73 591 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 IL36AQ9UHA7 158 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 KMT2EQ8IZD2 1858 aa14.2□□□□□ -0.14
RPAIN-217ENST00000575711 CCDC163A0A0D9SF12 145 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 KCNK1O00180 336 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 CES2O00748 559 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 AXIN1O15169 862 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 MTSS1O43312 755 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 ZNF189O75820 626 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 POP4O95707 220 aaKnown RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 ADH1BP00325 375 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 IL1BP01584 269 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 PRNPP04156 253 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 RBP3P10745 1247 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 ACADMP11310 421 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 TDGF1P13385 188 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 PSMD8P48556 350 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 RPS14P62263 151 aaKnown RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 ETF1P62495 437 aaKnown RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 IFI35P80217 286 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 ZBTB16Q05516 673 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 NSUN2Q08J23 767 aaKnown RBP eCLIP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 CST6Q15828 149 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 MYLK3Q32MK0 819 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 TTC31Q49AM3 519 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 FAM46CQ5VWP2 391 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 HEATR6Q6AI08 1181 aaKnown RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 B4GALNT4Q76KP1 1039 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 CDKL3Q8IVW4 592 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 OR6K2Q8NGY2 324 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 GRIN3AQ8TCU5 1115 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 NAP1L3Q99457 506 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 FAM118BQ9BPY3 351 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 MGME1Q9BQP7 344 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 FRMD8P1Q9BZ68 369 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 SLC6A17Q9H1V8 727 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 NT5MQ9NPB1 228 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 RBM22Q9NW64 420 aaKnown RBP eCLIP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 AMACRQ9UHK6 382 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 EVLQ9UI08 416 aaPredicted RBP14.19□□□□□ -0.14
RPAIN-217ENST00000575711 SCML1Q9UN30 329 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 NUP205Q92621 2012 aa14.19□□□□□ -0.14
RPAIN-217ENST00000575711 ZDBF2Q9HCK1 2354 aa14.18□□□□□ -0.14
RPAIN-217ENST00000575711 MYO18AQ92614 2054 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms