RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 LEFTY1O75610 366 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 SERPINF2P08697 491 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 CYLC1P35663 651 aaPredicted RBP21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 PAPOLAP51003 745 aaKnown RBP21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 SNRPD1P62314 119 aaKnown RBP21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 CNTN1Q12860 1018 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 KIAA0895LQ68EN5 471 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 CCDC170Q8IYT3 715 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 NPWQ8N729 165 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 NETO2Q8NC67 525 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 CASKIN2Q8WXE0 1202 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 BIRC7Q96CA5 298 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 ZDHHC6Q9H6R6 413 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 FSCN3Q9NQT6 498 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 UBA2Q9UBT2 640 aaPredicted RBP21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 SLC6A14Q9UN76 642 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 WASF2Q9Y6W5 498 aa21.08■□□□□ 0.96
HCFC1R1-208ENST00000575214 CHD5Q8TDI0 1954 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 SLC7A4O43246 635 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 GSRP00390 522 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 AMPD1P23109 780 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 MAN1A1P33908 653 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 MAGEA1P43355 309 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 INO80DQ53TQ3 878 aaPredicted RBP21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 ZFYVE27Q5T4F4 411 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 AGBL4Q5VU57 503 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 TMCO3Q6UWJ1 677 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 ARHGAP12Q8IWW6 846 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 LZTR1Q8N653 840 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 OR2AP1Q8NGE2 309 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 OR6K2Q8NGY2 324 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 PPP1R16AQ96I34 528 aa21.07■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3DA0A087WVF3 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3IA0A087WXS9 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3EA0A087X179 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3KA0A087X1G2 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 A0A1B0GTW7 788 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3FA6NER0 549 aaPredicted RBP21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3LB9A6J9 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 J3KR12 359 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 BCAT2O15382 392 aaPredicted RBP21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3HP0C7X1 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 ENGP17813 658 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TAS2R40P59535 323 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 RHOAP61586 193 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 CCDC15Q0P6D6 951 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 SPA17Q15506 151 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 ATP13A4Q4VNC1 1196 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 ATXN7L2Q5T6C5 722 aaPredicted RBP21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 STPG1Q5TH74 334 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 AFMIDQ63HM1 303 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3GQ6DHY5 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3CQ6IPX1 549 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 PLPP6Q8IY26 295 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 TBC1D3Q8IZP1 549 aaPredicted RBP21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 FAM131CQ96AQ9 280 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 ARRDC3Q96B67 414 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 GDAP1L1Q96MZ0 367 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 SP110Q9HB58 689 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 CAPN10Q9HC96 672 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 ETNK2Q9NVF9 386 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 KLHL11Q9NVR0 708 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 DLL3Q9NYJ7 618 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 MFHAS1Q9Y4C4 1052 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 DCHS1Q96JQ0 3298 aa21.06■□□□□ 0.96
HCFC1R1-208ENST00000575214 RNF103O00237 685 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 KRIT1O00522 736 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 PLRG1O43660 514 aaKnown RBP21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 PRAMEF11O60813 436 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 MTA2O94776 668 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 IGHV4-34P06331 123 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 KRT7P08729 469 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 ARHGAP25P42331 645 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 MAPK8P45983 427 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 LIMK1P53667 647 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 ATXN3P54252 364 aaPredicted RBP21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 PUM1Q14671 1186 aaKnown RBP eCLIP21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 KCTD6Q8NC69 237 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 TSC1Q92574 1164 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 GTPBP2Q9BX10 602 aaKnown RBP21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 CALN1Q9BXU9 219 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 KDM4CQ9H3R0 1056 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 PDFQ9HBH1 243 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 TMEM9BQ9NQ34 198 aa21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 RCOR3Q9P2K3 495 aaPredicted RBP21.05■□□□□ 0.96
HCFC1R1-208ENST00000575214 CACNA1AO00555 2505 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 SOWAHDA6NJG2 315 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 SLC30A4O14863 429 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 LCA5LO95447 670 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 IGSF6O95976 241 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 CD48P09326 243 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 CD27P26842 260 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 GKP32189 559 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 SERPINB6P35237 376 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 RAD51Q06609 339 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 MMRN1Q13201 1228 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 PIP5KL1Q5T9C9 394 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 ERN2Q76MJ5 926 aaKnown RBP21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 TMTC1Q8IUR5 882 aa21.04■□□□□ 0.96
HCFC1R1-208ENST00000575214 SPC24Q8NBT2 197 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms