RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ELAVL3Q14576 367 aaKnown RBP17.36■□□□□ 0.37
NUP88-210ENST00000574867 DRICH1Q6PGQ1 229 aaPredicted RBP17.36■□□□□ 0.37
NUP88-210ENST00000574867 DARS2Q6PI48 645 aaKnown RBP17.36■□□□□ 0.37
NUP88-210ENST00000574867 CREG2Q8IUH2 290 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 OR2AP1Q8NGE2 309 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 ATG4AQ8WYN0 398 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 PTPRN2Q92932 1015 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 C1QTNF1Q9BXJ1 281 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 POLMQ9NP87 494 aaPredicted RBP17.36■□□□□ 0.37
NUP88-210ENST00000574867 LHX3Q9UBR4 397 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 FARP1Q9Y4F1 1045 aaPredicted RBP17.36■□□□□ 0.37
NUP88-210ENST00000574867 PRR33A8MZF0 331 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 GPR37L1O60883 481 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 SIN3BO75182 1162 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 IGSF6O95976 241 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 PAFAH1B1P43034 410 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 C9orf64Q5T6V5 341 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 TMEM105Q8N8V8 129 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 LRRN4Q8WUT4 740 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 CAPZA3Q96KX2 299 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 IL12RB2Q99665 862 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 MGME1Q9BQP7 344 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 TM6SF2Q9BZW4 377 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 TNKS2Q9H2K2 1166 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 C11orf16Q9NQ32 467 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 PRSS16Q9NQE7 514 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 DNPEPQ9ULA0 475 aa17.36■□□□□ 0.37
NUP88-210ENST00000574867 STK10O94804 968 aaKnown RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 PAPSS2O95340 614 aaPredicted RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 MAPK8P45983 427 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 NSUN2Q08J23 767 aaKnown RBP eCLIP17.35■□□□□ 0.37
NUP88-210ENST00000574867 CARD16Q5EG05 197 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 TSEN2Q8NCE0 465 aaKnown RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 OR2A12Q8NGT7 310 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 KIF18AQ8NI77 898 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 C1orf54Q8WWF1 131 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 ZNF592Q92610 1267 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 CD248Q9HCU0 757 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 RBM22Q9NW64 420 aaKnown RBP eCLIP17.35■□□□□ 0.374e-7■■■■■ 29.9
NUP88-210ENST00000574867 SEPT10Q9P0V9 454 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 ESPNB1AK53 854 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 KRIT1O00522 736 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 ZNF500O60304 480 aaPredicted RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 RBL1P28749 1068 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 CSNK1DP48730 415 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 ZBTB17Q13105 803 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 OASLQ15646 514 aaKnown RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 TMEM92Q6UXU6 159 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 DSG4Q86SJ6 1040 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 PRELID2Q8N945 189 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 C12orf50Q8NA57 414 aaPredicted RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 OR2T3Q8NH03 318 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 OR8D1Q8WZ84 308 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 POLR1EQ9GZS1 481 aaKnown RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 MTG2Q9H4K7 406 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 SPATA6Q9NWH7 488 aaPredicted RBP17.35■□□□□ 0.37
NUP88-210ENST00000574867 SMARCAL1Q9NZC9 954 aa17.35■□□□□ 0.37
NUP88-210ENST00000574867 KMT2EQ8IZD2 1858 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 FAM86C2PA6NEL3 165 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 RNF103O00237 685 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 ZBTB24O43167 697 aaPredicted RBP17.34■□□□□ 0.37
NUP88-210ENST00000574867 JCHAINP01591 159 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 COL9A1P20849 921 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 PTPN3P26045 913 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 CXCL12P48061 93 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 CCNHP51946 323 aaPredicted RBP17.34■□□□□ 0.37
NUP88-210ENST00000574867 RAD51Q06609 339 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 CYP1B1Q16678 543 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 TEX44Q53QW1 395 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 RALGPS1Q5JS13 557 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 ALG1LQ6GMV1 187 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 KIAA1211LQ6NV74 962 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 B4GALNT4Q76KP1 1039 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 TSTD1Q8NFU3 115 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 ZNF419Q96HQ0 510 aaPredicted RBP17.34■□□□□ 0.37
NUP88-210ENST00000574867 NT5MQ9NPB1 228 aa17.34■□□□□ 0.37
NUP88-210ENST00000574867 ZDBF2Q9HCK1 2354 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 KCNN4O15554 427 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 BNIP3LO60238 219 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 RNASEH1O60930 286 aaKnown RBP17.33■□□□□ 0.37
NUP88-210ENST00000574867 ALDH1A2O94788 518 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 ITGAVP06756 1048 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 WASHC5Q12768 1159 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 TMEM31Q5JXX7 168 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 DPY19L3Q6ZPD9 716 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 LRIG1Q96JA1 1093 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 EXOC2Q96KP1 924 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 AP1M1Q9BXS5 423 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 RSPH9Q9H1X1 276 aaPredicted RBP17.33■□□□□ 0.37
NUP88-210ENST00000574867 HECAQ9UBI9 543 aaPredicted RBP17.33■□□□□ 0.37
NUP88-210ENST00000574867 TRHDEQ9UKU6 1024 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 ATP8A1Q9Y2Q0 1164 aa17.33■□□□□ 0.37
NUP88-210ENST00000574867 TCRBV21S2A2A0A5A6 115 aa17.33■□□□□ 0.36
NUP88-210ENST00000574867 MUSKO15146 869 aa17.33■□□□□ 0.36
NUP88-210ENST00000574867 HLA-DQB2P05538 268 aa17.33■□□□□ 0.36
NUP88-210ENST00000574867 CES1P23141 567 aa17.33■□□□□ 0.36
NUP88-210ENST00000574867 STIP1P31948 543 aaKnown RBP17.33■□□□□ 0.36
NUP88-210ENST00000574867 AP1S1P61966 158 aa17.33■□□□□ 0.36
NUP88-210ENST00000574867 SATB1Q01826 763 aa17.33■□□□□ 0.36
NUP88-210ENST00000574867 TUBB2AQ13885 445 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms