RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 PLXND1Q9Y4D7 1925 aa13.27□□□□□ -0.28
CNOT1-217ENST00000569263 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 C1QTNF3-AMACRE9PGA6 284 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 H0Y858 1186 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 MCF2LO15068 1137 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 ADH1BP00325 375 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 IL1BP01584 269 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 HSPA9P38646 679 aaKnown RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 MMP13P45452 471 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 RENBPP51606 427 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 CCNHP51946 323 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 GNG11P61952 73 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 RPS14P62263 151 aaKnown RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 RAD51Q06609 339 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 PPIDQ08752 370 aaKnown RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 CYTH1Q15438 398 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 CST6Q15828 149 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 ATXN7L2Q5T6C5 722 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 MARC1Q5VT66 337 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 DPY19L3Q6ZPD9 716 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 WDR5BQ86VZ2 330 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 MMAAQ8IVH4 418 aaKnown RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 PRSS33Q8NF86 280 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 EXOC2Q96KP1 924 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 SPACA7Q96KW9 195 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 TSGA13Q96PP4 275 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 LGMNQ99538 433 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 HERPUD2Q9BSE4 406 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 BRD8Q9H0E9 1235 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 ZDHHC6Q9H6R6 413 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 ZSCAN32Q9NX65 697 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 SAE1Q9UBE0 346 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 HECAQ9UBI9 543 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-217ENST00000569263 LHX3Q9UBR4 397 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 IL36AQ9UHA7 158 aa13.27□□□□□ -0.29
CNOT1-217ENST00000569263 KRIT1O00522 736 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 MATN3O15232 486 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ZNF217O75362 1048 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ZNF821O75541 412 aaPredicted RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 PRNPP04156 253 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 CHRNA3P32297 505 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 PTPN5P54829 565 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 OTUD4Q01804 1114 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ZBTB16Q05516 673 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ZNF33AQ06730 810 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 SLC10A7Q0GE19 358 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 SFSWAPQ12872 951 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 BYSLQ13895 437 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 USP39Q53GS9 565 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ZC3H14Q6PJT7 736 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 FANCMQ8IYD8 2048 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 TTC13Q8NBP0 860 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 CHST14Q8NCH0 376 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 OR6K2Q8NGY2 324 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 PIP4K2CQ8TBX8 421 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 ACTL9Q8TC94 416 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 GANCQ8TET4 914 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 LRRN4Q8WUT4 740 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 TFB1MQ8WVM0 346 aaKnown RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 PSKH2Q96QS6 385 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 FERMT1Q9BQL6 677 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 HEPHQ9BQS7 1158 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 IRF2BPLQ9H1B7 796 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 NT5MQ9NPB1 228 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 KCND1Q9NSA2 647 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 EVLQ9UI08 416 aaPredicted RBP13.26□□□□□ -0.29
CNOT1-217ENST00000569263 SCML1Q9UN30 329 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 CYP8B1Q9UNU6 501 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 TTLL3Q9Y4R7 772 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 PCDHGA2Q9Y5H1 932 aa13.26□□□□□ -0.29
CNOT1-217ENST00000569263 HACD1B0YJ81 288 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 H7C0C1 242 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 KPNA3O00505 521 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 MID1O15344 667 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 CEP104O60308 925 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 POP4O95707 220 aaKnown RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 ATP1A1P05023 1023 aaKnown RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 CCNB1P14635 433 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 C5AR1P21730 350 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 CXCR5P32302 372 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 SLC8A1P32418 973 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 ATP5OP48047 213 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 ITKQ08881 620 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 TCF15Q12870 199 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 PRKD1Q15139 912 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 NOMO1Q15155 1222 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 HS1BP3Q53T59 392 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 SLC13A5Q86YT5 568 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 CDKL3Q8IVW4 592 aaPredicted RBP13.25□□□□□ -0.29
CNOT1-217ENST00000569263 TMIEQ8NEW7 156 aa13.25□□□□□ -0.29
CNOT1-217ENST00000569263 MAML1Q92585 1016 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms