RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GKP32189 559 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 ACSL1P33121 698 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 MPLP40238 635 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 DYNLT1P63172 113 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 LLGL1Q15334 1064 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 LRRC38Q5VT99 294 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 AFMIDQ63HM1 303 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 NCBP2-AS2Q69YL0 99 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 USP30Q70CQ3 517 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 KIAA2013Q8IYS2 634 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 AADATQ8N5Z0 425 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 OR2AP1Q8NGE2 309 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 OR14C36Q8NHC7 312 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 PCDH19Q8TAB3 1148 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 CASKIN2Q8WXE0 1202 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 PPP1R16AQ96I34 528 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 LOXL4Q96JB6 756 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
CDT1-203ENST00000569140 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 MIR1-1HGQ9H1L0 117 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 NEUROG2Q9H2A3 272 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 SMOC1Q9H4F8 434 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 SGK2Q9HBY8 427 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 IPO11Q9UI26 975 aaKnown RBP13.03□□□□□ -0.32
CDT1-203ENST00000569140 SARDHQ9UL12 918 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 THADAQ6YHU6 1953 aa13.03□□□□□ -0.32
CDT1-203ENST00000569140 PLXND1Q9Y4D7 1925 aa13.02□□□□□ -0.32
CDT1-203ENST00000569140 BTNL10A8MVZ5 291 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 PJA2O43164 708 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 GSRP00390 522 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 ITPKAP23677 461 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 IL4RP24394 825 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 RAD51Q06609 339 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 IL10RBQ08334 325 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 CNTN1Q12860 1018 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 ZNF235Q14590 738 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 INO80DQ53TQ3 878 aaPredicted RBP13.02□□□□□ -0.33
CDT1-203ENST00000569140 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 KAZNQ674X7 775 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 BBS5Q8N3I7 341 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 C12orf50Q8NA57 414 aaPredicted RBP13.02□□□□□ -0.33
CDT1-203ENST00000569140 FAM71BQ8TC56 605 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 FOXJ1Q92949 421 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 ISG20Q96AZ6 181 aaKnown RBP13.02□□□□□ -0.33
CDT1-203ENST00000569140 CALR3Q96L12 384 aaKnown RBP13.02□□□□□ -0.33
CDT1-203ENST00000569140 TSGA10Q9BZW7 698 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 C6orf106Q9H6K1 298 aaPredicted RBP13.02□□□□□ -0.33
CDT1-203ENST00000569140 PDFQ9HBH1 243 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
CDT1-203ENST00000569140 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 FZD4Q9ULV1 537 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 HEY1Q9Y5J3 304 aa13.02□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3DA0A087WVF3 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3IA0A087WXS9 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3EA0A087X179 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3KA0A087X1G2 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 CXorf51AA0A1B0GTR3 108 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3FA6NER0 549 aaPredicted RBP13.01□□□□□ -0.33
CDT1-203ENST00000569140 LRRC72A6NJI9 287 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3LB9A6J9 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 ZNF821O75541 412 aaPredicted RBP13.01□□□□□ -0.33
CDT1-203ENST00000569140 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 CFIP05156 583 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 UGT2B4P06133 528 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3HP0C7X1 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 MAOBP27338 520 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 ADPRHP54922 357 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 LBRQ14739 615 aaKnown RBP13.01□□□□□ -0.33
CDT1-203ENST00000569140 CYTH1Q15438 398 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 MYLK3Q32MK0 819 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 WDR45BQ5MNZ6 344 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TMCO4Q5TGY1 634 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3GQ6DHY5 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3CQ6IPX1 549 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 MFSD7Q6UXD7 560 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 SLC41A1Q8IVJ1 513 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TBC1D3Q8IZP1 549 aaPredicted RBP13.01□□□□□ -0.33
CDT1-203ENST00000569140 SYCE1Q8N0S2 351 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 PQLC3Q8N755 202 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TMIEQ8NEW7 156 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 LRRN4Q8WUT4 740 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 KRT35Q92764 455 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 ARRDC3Q96B67 414 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 RNF157Q96PX1 679 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 SEMA4GQ9NTN9 838 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 LHX3Q9UBR4 397 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 GUCA1BQ9UMX6 200 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 TTLL3Q9Y4R7 772 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 PCDHGA5Q9Y5G8 931 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 ADGRG1Q9Y653 693 aa13.01□□□□□ -0.33
CDT1-203ENST00000569140 CHD5Q8TDI0 1954 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms