RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 CYP4V2Q6ZWL3 525 aaPredicted RBP25.65■■□□□ 1.7
FANCA-228ENST00000567943 TMIEQ8NEW7 156 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 BTBD6Q96KE9 485 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 CCDC114Q96M63 670 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 CHP1Q99653 195 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 NCAPGQ9BPX3 1015 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 CEP44Q9C0F1 390 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 ANAPC7Q9UJX3 599 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 FCF1Q9Y324 198 aaKnown RBP25.65■■□□□ 1.7
FANCA-228ENST00000567943 WASF2Q9Y6W5 498 aa25.65■■□□□ 1.7
FANCA-228ENST00000567943 AKAP13Q12802 2813 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3DA0A087WVF3 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3IA0A087WXS9 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3EA0A087X179 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3KA0A087X1G2 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 SSU72P8A0A1W2PR75 194 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3FA6NER0 549 aaPredicted RBP25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3LB9A6J9 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 KCNK3O14649 394 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3HP0C7X1 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 PCK1P35558 622 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 PIGHQ14442 188 aaPredicted RBP25.64■■□□□ 1.7
FANCA-228ENST00000567943 ACAP1Q15027 740 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 ASTE1Q2TB18 679 aaPredicted RBP25.64■■□□□ 1.7
FANCA-228ENST00000567943 ARSIQ5FYB1 569 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3GQ6DHY5 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3CQ6IPX1 549 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 IL27RAQ6UWB1 636 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 ZNF354CQ86Y25 554 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 TBC1D3Q8IZP1 549 aaPredicted RBP25.64■■□□□ 1.7
FANCA-228ENST00000567943 KCTD15Q96SI1 283 aaPredicted RBP25.64■■□□□ 1.7
FANCA-228ENST00000567943 KDM4CQ9H3R0 1056 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 HPCAL4Q9UM19 191 aa25.64■■□□□ 1.7
FANCA-228ENST00000567943 FARP1Q9Y4F1 1045 aaPredicted RBP25.64■■□□□ 1.7
FANCA-228ENST00000567943 CXorf51AA0A1B0GTR3 108 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 SPAARA0A1B0GVQ0 90 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 WASH4PA8MWX3 477 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 EIF3CLB5ME19 914 aaKnown RBP25.63■■□□□ 1.69
FANCA-228ENST00000567943 EEF2KO00418 725 aaKnown RBP25.63■■□□□ 1.69
FANCA-228ENST00000567943 FGF10O15520 208 aaPredicted RBP25.63■■□□□ 1.69
FANCA-228ENST00000567943 AKR1B10O60218 316 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 CER1O95813 267 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 ZNF883P0CG24 379 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 HTR7P34969 479 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 CTSKP43235 329 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 TBX2Q13207 712 aaPredicted RBP25.63■■□□□ 1.69
FANCA-228ENST00000567943 TEAD4Q15561 434 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 LEKR1Q6ZMV7 388 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 CNGA4Q8IV77 575 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 GRIN3AQ8TCU5 1115 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 CNTNAP3BQ96NU0 1288 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 EIF3CQ99613 913 aaKnown RBP25.63■■□□□ 1.69
FANCA-228ENST00000567943 PACSIN1Q9BY11 444 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 CNTNAP3Q9BZ76 1288 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 KLC2Q9H0B6 622 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 SLC32A1Q9H598 525 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 TM7SF3Q9NS93 570 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 IP6K2Q9UHH9 426 aa25.63■■□□□ 1.69
FANCA-228ENST00000567943 A0A1W2PR77 199 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 AKR1B15C9JRZ8 316 aaPredicted RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 KPNA3O00505 521 aaPredicted RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 VILLO15195 856 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 LEFTY1O75610 366 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 TOP3BO95985 862 aaKnown RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 TCF4P15884 667 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 IL1R2P27930 398 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 RECQLP46063 649 aaPredicted RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 SHC2P98077 582 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 PPP6R3Q5H9R7 873 aaPredicted RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 DBX2Q6ZNG2 339 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 PSTKQ8IV42 348 aaKnown RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 PCDH20Q8N6Y1 951 aaKnown RBP25.62■■□□□ 1.69
FANCA-228ENST00000567943 IL36AQ9UHA7 158 aa25.62■■□□□ 1.69
FANCA-228ENST00000567943 RASA4BC9J798 803 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 DAPK3O43293 454 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 RASA4O43374 803 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 KDELR3O43731 214 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 CBFA2T3O75081 653 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 PRNPP04156 253 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 MAT2AP31153 395 aaKnown RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 DNA2P51530 1060 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 GEMIN4P57678 1058 aaKnown RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 YBEYP58557 167 aaPredicted RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 CARD16Q5EG05 197 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 TRIM69Q86WT6 500 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 GAS2L3Q86XJ1 694 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 NAXDQ8IW45 347 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 UMODL1-AS1Q8N2C9 162 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 NIPA2Q8N8Q9 360 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 ZNF564Q8TBZ8 553 aaPredicted RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 CTNNBL1Q8WYA6 563 aaPredicted RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 ISG20Q96AZ6 181 aaKnown RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 HMCESQ96FZ2 354 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 CCDC42Q96M95 316 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 ZWILCHQ9H900 591 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 NHEJ1Q9H9Q4 299 aaPredicted RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 CTTNBP2NLQ9P2B4 639 aa25.61■■□□□ 1.69
FANCA-228ENST00000567943 MAP1BP46821 2468 aaKnown RBP25.61■■□□□ 1.69
FANCA-228ENST00000567943 EPG5Q9HCE0 2579 aa25.6■■□□□ 1.69
FANCA-228ENST00000567943 H0Y8X5 98 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms