RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SNRNP35Q16560 246 aaKnown RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 C19orf54Q5BKX5 351 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 TTMPQ5BVD1 217 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ARHGEF16Q5VV41 709 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 RNF219Q5W0B1 726 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 DENND2CQ68D51 928 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 MIS18BP1Q6P0N0 1132 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 CATSPERGQ6ZRH7 1159 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 TADA2BQ86TJ2 420 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 EXOC8Q8IYI6 725 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 DAW1Q8N136 415 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 FBXL13Q8NEE6 735 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 NSUN6Q8TEA1 469 aaKnown RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 GRK7Q8WTQ7 553 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 SNX33Q8WV41 574 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 AUTS2Q8WXX7 1259 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 RIN2Q8WYP3 895 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ST8SIA2Q92186 375 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 CENPTQ96BT3 561 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 VCPIP1Q96JH7 1222 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 IFT74Q96LB3 600 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 PLEKHG4BQ96PX9 1271 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 CEP89Q96ST8 783 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 RMDN3Q96TC7 470 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ZSWIM1Q9BR11 485 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 TMEM109Q9BVC6 243 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 MOV10L1Q9BXT6 1211 aaKnown RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 GPR87Q9BY21 358 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ROPN1BQ9BZX4 212 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 DDX47Q9H0S4 455 aaKnown RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 PABPC3Q9H361 631 aaKnown RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 UBE2ZQ9H832 354 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ACTR5Q9H9F9 607 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ROPN1Q9HAT0 212 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 KMT5AQ9NQR1 393 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 SEPT11Q9NVA2 429 aaKnown RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 HOXC10Q9NYD6 342 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 CTTNBP2NLQ9P2B4 639 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-217ENST00000567817 AMACRQ9UHK6 382 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 TBX20Q9UMR3 447 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 ALG6Q9Y672 507 aa5.53□□□□□ -1.52
CAPN3-217ENST00000567817 MYH7BA7E2Y1 1941 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PTPRZ1P23471 2315 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 BRWD1Q9NSI6 2320 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 EPG5Q9HCE0 2579 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 GOLGA6L7A0A1B0GV03 622 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PROB1E7EW31 1015 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 FOXN3O00409 490 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 CYR61O00622 381 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 HOXA3O43365 443 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 THAP12O43422 761 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SPOPO43791 374 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 EXTL3O43909 919 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SLC25A27O95847 323 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 GAS8O95995 478 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 AGTP01019 485 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TRIM49P0CI25 452 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TRIM49CP0CI26 452 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ALAS1P13196 640 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 RARGP13631 454 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 CYP11B1P15538 503 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 VCAM1P19320 739 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ABCB4P21439 1286 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TBXAS1P24557 533 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 RFC2P35250 354 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ACVRL1P37023 503 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PEX3P56589 373 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF844Q08AG5 666 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 CALCOCO2Q13137 446 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 MRPL49Q13405 166 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PRPF4BQ13523 1007 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PGM5Q15124 567 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SHROOM1Q2M3G4 852 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 LSM12Q3MHD2 195 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TTC31Q49AM3 519 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ODF2Q5BJF6 829 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 XKR9Q5GH70 373 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 KIAA1755Q5JYT7 1200 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 FAM102BQ5T8I3 360 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 C1QL3Q5VWW1 255 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 DUPD1Q68J44 220 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 NAIF1Q69YI7 327 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ACAD10Q6JQN1 1059 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 LHFPL2Q6ZUX7 228 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TRMT10CQ7L0Y3 403 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 DOK3Q7L591 496 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TAOK1Q7L7X3 1001 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SUGP1Q8IWZ8 645 aaKnown RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 GPD1LQ8N335 351 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 SLC16A11Q8NCK7 471 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 TMEM161BQ8NDZ6 487 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 KLHDC9Q8NEP7 349 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF564Q8TBZ8 553 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PARD3BQ8TEW8 1205 aa5.52□□□□□ -1.53
CAPN3-217ENST00000567817 UBLCP1Q8WVY7 318 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-217ENST00000567817 PGM2Q96G03 612 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms