RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 ZSCAN32Q9NX65 697 aa20.65■□□□□ 0.9
RNF40-210ENST00000566811 HACD1B0YJ81 288 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 C1QTNF3-AMACRE9PGA6 284 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 J3KR12 359 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 AXIN1O15169 862 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 PRNPP04156 253 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 SP9P0CG40 484 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 KRT10P13645 584 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 GABRG2P18507 467 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 DYNLT1P63172 113 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 FOXK2Q01167 660 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 NSUN2Q08J23 767 aaKnown RBP eCLIP20.64■□□□□ 0.89
RNF40-210ENST00000566811 XRCC4Q13426 336 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 ZNF235Q14590 738 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 LBRQ14739 615 aaKnown RBP20.64■□□□□ 0.89
RNF40-210ENST00000566811 ZNF366Q8N895 744 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 MDGA1Q8NFP4 955 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 HMGB4Q8WW32 186 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 MAIP1Q8WWC4 291 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 MAML1Q92585 1016 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 HAUS1Q96CS2 278 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 SIPA1Q96FS4 1042 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 SPACA7Q96KW9 195 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 MRGPRX1Q96LB2 322 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 PSKH2Q96QS6 385 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 TLR10Q9BXR5 811 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 FRMD8P1Q9BZ68 369 aaPredicted RBP20.64■□□□□ 0.89
RNF40-210ENST00000566811 FCF1Q9Y324 198 aaKnown RBP20.64■□□□□ 0.89
RNF40-210ENST00000566811 ANKRD36A6QL64 1941 aa20.64■□□□□ 0.89
RNF40-210ENST00000566811 K7ERQ8 282 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 MATN3O15232 486 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 SMAD6O43541 496 aaKnown RBP20.63■□□□□ 0.89
RNF40-210ENST00000566811 DNTTP04053 509 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 ACADMP11310 421 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 NDUFV2P19404 249 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 CSNK1DP48730 415 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 NUMBP49757 651 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 CCDC15Q0P6D6 951 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 CARD16Q5EG05 197 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 ZNF569Q5MCW4 686 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 MARC1Q5VT66 337 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 DCAF12L1Q5VU92 463 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 KBTBD6Q86V97 674 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 TMPRSS6Q8IU80 811 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 CCDC13Q8IYE1 715 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 CCNYQ8ND76 341 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 TMIEQ8NEW7 156 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 OR2A12Q8NGT7 310 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 PPP1R16AQ96I34 528 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 OSBPL1AQ9BXW6 950 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 DMDP11532 3685 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 GVINP1Q7Z2Y8 2422 aa20.63■□□□□ 0.89
RNF40-210ENST00000566811 CES2O00748 559 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 KCNK3O14649 394 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 ZNF821O75541 412 aaPredicted RBP20.62■□□□□ 0.89
RNF40-210ENST00000566811 IGLV3-19P01714 112 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 C5AR1P21730 350 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 DNA2P51530 1060 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 SLC10A2Q12908 348 aaPredicted RBP20.62■□□□□ 0.89
RNF40-210ENST00000566811 NOMO1Q15155 1222 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 USP39Q53GS9 565 aaKnown RBP20.62■□□□□ 0.89
RNF40-210ENST00000566811 ARHGAP36Q6ZRI8 547 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 USP30Q70CQ3 517 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 PGBD3Q8N328 593 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 TEX26Q8N6G2 289 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 ZBTB44Q8NCP5 570 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 TFB1MQ8WVM0 346 aaKnown RBP20.62■□□□□ 0.89
RNF40-210ENST00000566811 HEMGNQ9BXL5 484 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 MKRN2Q9H000 416 aaKnown RBP20.62■□□□□ 0.89
RNF40-210ENST00000566811 IL36AQ9UHA7 158 aa20.62■□□□□ 0.89
RNF40-210ENST00000566811 SPAG17Q6Q759 2223 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 USP27XA6NNY8 438 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 NEBLO76041 1014 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 POP4O95707 220 aaKnown RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 PEX11BO96011 259 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 CES1P23141 567 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 OXTRP30559 389 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 MMP13P45452 471 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 CCNHP51946 323 aaPredicted RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 IFI35P80217 286 aaPredicted RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 KLF1Q13351 362 aaPredicted RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 ZNF211Q13398 564 aaPredicted RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 CST6Q15828 149 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 KIAA1324Q6UXG2 1013 aaKnown RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 TP53INP2Q8IXH6 220 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 STK40Q8N2I9 435 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 SLC35F6Q8N357 371 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 NKD2Q969F2 451 aaPredicted RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 PBKQ96KB5 322 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 TUBGCP5Q96RT8 1024 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 FAM129BQ96TA1 746 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 VAT1Q99536 393 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 HEPHQ9BQS7 1158 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 USP36Q9P275 1121 aaKnown RBP20.61■□□□□ 0.89
RNF40-210ENST00000566811 LHX3Q9UBR4 397 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 ZKSCAN5Q9Y2L8 839 aa20.61■□□□□ 0.89
RNF40-210ENST00000566811 CCNB1P14635 433 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 CHRNA3P32297 505 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 AP1S1P61966 158 aa20.6■□□□□ 0.89
RNF40-210ENST00000566811 RPS14P62263 151 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms