RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TM9SF3Q9HD45 589 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 FSCN3Q9NQT6 498 aa20.23■□□□□ 0.83
CMTM3-211ENST00000565922 DNAAF2Q9NVR5 837 aaKnown RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 FCF1Q9Y324 198 aaKnown RBP20.23■□□□□ 0.83
CMTM3-211ENST00000565922 ZNF821O75541 412 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-211ENST00000565922 CTSLP07711 333 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 H2AFZP0C0S5 128 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 CSRP1P21291 193 aaKnown RBP20.22■□□□□ 0.83
CMTM3-211ENST00000565922 ARL4AP40617 200 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 HCAR3P49019 387 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 SLC14A1Q13336 389 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 DPYSL2Q16555 572 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 CA9Q16790 459 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 POM121L1PQ3SYA9 428 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 RFX8Q6ZV50 586 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 H2AFVQ71UI9 128 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 PRPF39Q86UA1 669 aaKnown RBP20.22■□□□□ 0.83
CMTM3-211ENST00000565922 CHST14Q8NCH0 376 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 OR2AP1Q8NGE2 309 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 ZNF564Q8TBZ8 553 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-211ENST00000565922 HMCESQ96FZ2 354 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 KCTD15Q96SI1 283 aaPredicted RBP20.22■□□□□ 0.83
CMTM3-211ENST00000565922 TM6SF2Q9BZW4 377 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 SLC32A1Q9H598 525 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 NOL6Q9H6R4 1146 aaKnown RBP20.22■□□□□ 0.83
CMTM3-211ENST00000565922 UVRAGQ9P2Y5 699 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 NENFQ9UMX5 172 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 DOCK9Q9BZ29 2069 aa20.22■□□□□ 0.83
CMTM3-211ENST00000565922 ANKRD36A6QL64 1941 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 TRPM6Q9BX84 2022 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 ARHGAP42A6NI28 874 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 UPK3BL1B0FP48 263 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 UPK3BL2E5RIL1 263 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 H3BRJ5 948 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 LEFTY1O75610 366 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 CD160O95971 181 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 KCNA4P22459 653 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 METAP1P53582 386 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 RAD51Q06609 339 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 SERINC3Q13530 473 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 HADHQ16836 314 aaKnown RBP20.21■□□□□ 0.83
CMTM3-211ENST00000565922 SLC45A4Q5BKX6 768 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 ARSIQ5FYB1 569 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 NEK5Q6P3R8 708 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 CYP4V2Q6ZWL3 525 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-211ENST00000565922 ERN2Q76MJ5 926 aaKnown RBP20.21■□□□□ 0.83
CMTM3-211ENST00000565922 TRIM69Q86WT6 500 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 RYBPQ8N488 228 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-211ENST00000565922 LZTR1Q8N653 840 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 TEKT4Q8WW24 435 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 CCDC42Q96M95 316 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 GDAP1L1Q96MZ0 367 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 OSBPL1AQ9BXW6 950 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 HDAC8Q9BY41 377 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 ZDHHC6Q9H6R6 413 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 CTTNBP2NLQ9P2B4 639 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 DMTF1Q9Y222 760 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 WASF2Q9Y6W5 498 aa20.21■□□□□ 0.83
CMTM3-211ENST00000565922 CNOT1A5YKK6 2376 aaKnown RBP20.21■□□□□ 0.83
CMTM3-211ENST00000565922 C10orf142B7Z368 130 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 AKR1B15C9JRZ8 316 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-211ENST00000565922 LATO43561 262 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 TMCC1O94876 653 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 IGSF6O95976 241 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 ERCC2P18074 760 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 ITGB7P26010 798 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 CSNK1EP49674 416 aaKnown RBP20.2■□□□□ 0.82
CMTM3-211ENST00000565922 NEK3P51956 506 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 PIP5KL1Q5T9C9 394 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 ARHGEF26Q96DR7 871 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 ORAI3Q9BRQ5 295 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 LRRC19Q9H756 370 aa20.2■□□□□ 0.82
CMTM3-211ENST00000565922 UBA2Q9UBT2 640 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-211ENST00000565922 A0A1B0GVT2 93 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 PLK4O00444 970 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 KCNK5O95279 499 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 POP4O95707 220 aaKnown RBP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ZNF883P0CG24 379 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 CEACAM1P13688 526 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 NOVA1P51513 510 aaKnown RBP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ADKP55263 362 aaKnown RBP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 C21orf59P57076 290 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 RHOAP61586 193 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 HNRNPDQ14103 355 aaKnown RBP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 SMTNL2Q2TAL5 461 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ASTE1Q2TB18 679 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 SETMARQ53H47 684 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ZSCAN30Q86W11 494 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 HSPH1Q92598 858 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ARRDC3Q96B67 414 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ANP32EQ9BTT0 268 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 AASDHPPTQ9NRN7 309 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ANKRD6Q9Y2G4 727 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 ACTL7AQ9Y615 435 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 SHROOM3Q8TF72 1996 aa20.19■□□□□ 0.82
CMTM3-211ENST00000565922 MED19A0JLT2 244 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-211ENST00000565922 VILLO15195 856 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 DFNA5O60443 496 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 TMEM253P0C7T8 217 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms