RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DNAAF4Q8WXU2 420 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 GOLGA1Q92805 767 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 PBKQ96KB5 322 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 LLPHQ9BRT6 129 aaKnown RBP4.54□□□□□ -1.68
LINC00561-201ENST00000565815 PRDM13Q9H4Q3 707 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 ASB6Q9NWX5 421 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 CFAP45Q9UL16 551 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 CNPY2Q9Y2B0 182 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 DOCK2Q92608 1830 aa4.54□□□□□ -1.68
LINC00561-201ENST00000565815 PI4KAP2A4QPH2 592 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 SLC16A3O15427 465 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 STRNO43815 780 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 IDEP14735 1019 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 CREB1P16220 341 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 GJB2P29033 226 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 FOXO1Q12778 655 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 KLF10Q13118 480 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 NECTIN1Q15223 517 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 RPS6KA2Q15349 733 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 UBAP2Q5T6F2 1119 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 PSRC1Q6PGN9 363 aaPredicted RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 PI4KAP1Q8N8J0 262 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 TRIB2Q92519 343 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 MAP4K1Q92918 833 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 EDC3Q96F86 508 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 TRMT61AQ96FX7 289 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 COG8Q96MW5 612 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 UPF3BQ9BZI7 483 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 CLSTN2Q9H4D0 955 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 CCDC134Q9H6E4 229 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 PLEKHA2Q9HB19 425 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 USP29Q9HBJ7 922 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 HERC5Q9UII4 1024 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 RABGAP1Q9Y3P9 1069 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 ROBO3Q96MS0 1386 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 GOLGA6L4A6NEF3 574 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 EXOC3O60645 756 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 SOAT2O75908 522 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 CASTP20810 708 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 COPB2P35606 906 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 FOLR3P41439 243 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 COPB1P53618 953 aaKnown RBP4.53□□□□□ -1.68
LINC00561-201ENST00000565815 GSDMDP57764 484 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 GSTO1P78417 241 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 PPFIA1Q13136 1202 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 SPATS1Q496A3 300 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 BEND3Q5T5X7 828 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 TSTD2Q5T7W7 516 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 PLA2G4DQ86XP0 818 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 LENG9Q96B70 501 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 ARHGEF3Q9NR81 526 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 RAPGEFL1Q9UHV5 662 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 COL4A3Q01955 1670 aa4.53□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A20PA6NIJ5 464 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 FIBPO43427 364 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CLTBP09497 229 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CSF1P09603 554 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CYP2B6P20813 491 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CST5P28325 142 aaPredicted RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 TMEM119Q4V9L6 283 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 LY6G5CQ5SRR4 150 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ZNF618Q5T7W0 954 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CDC42EP5Q6NZY7 148 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CEP70Q8NHQ1 597 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 TNMDQ9H2S6 317 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ASIC5Q9NY37 505 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 EHD3Q9NZN3 535 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 FOXJ2Q9P0K8 574 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 PCDHA10Q9Y5I2 948 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 PCDHAC2Q9Y5I4 1007 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ZNF236Q9UL36 1845 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 FRMPD3Q5JV73 1810 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 B8ZZF3 427 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 PI4K2BG5E9Z4 385 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 URI1O94763 535 aaPredicted RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 CD72P21854 359 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 RPS6KB1P23443 525 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ZNF75DP51815 510 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ZNF484Q5JVG2 852 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ZNF362Q5T0B9 420 aaPredicted RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ABHD17BQ5VST6 288 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 NAA16Q6N069 864 aaPredicted RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 BLOC1S2Q6QNY1 142 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 TMEM199Q8N511 208 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 PPM1EQ8WY54 764 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 LINC00476Q8WZB0 136 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 BADQ92934 168 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 JAKMIP1Q96N16 626 aaKnown RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 TTPALQ9BTX7 342 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 DDX23Q9BUQ8 820 aaKnown RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 EIF2AQ9BY44 585 aaKnown RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 NAT10Q9H0A0 1025 aaKnown RBP4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ABHD16BQ9H3Z7 469 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 KIF17Q9P2E2 1029 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 STEAP1Q9UHE8 339 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 GAKO14976 1311 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 PTPRFP10586 1907 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 MPPED1O15442 326 aa4.52□□□□□ -1.69
LINC00561-201ENST00000565815 ASNSP08243 561 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms