RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 ZNF653Q96CK0 615 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 TM6SF2Q9BZW4 377 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 MAGEH1Q9H213 219 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 CCDC86Q9H6F5 360 aaKnown RBP12.93□□□□□ -0.34
HERC2-206ENST00000564519 AASDHPPTQ9NRN7 309 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 TM7SF3Q9NS93 570 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 MYO1AQ9UBC5 1043 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 IL36AQ9UHA7 158 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 CA5BQ9Y2D0 317 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
HERC2-206ENST00000564519 SPEGQ15772 3267 aa12.93□□□□□ -0.34
HERC2-206ENST00000564519 FAM221BA6H8Z2 402 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 VILLO15195 856 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 KDELR3O43731 214 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 CBFA2T3O75081 653 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 PRNPP04156 253 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 GYPCP04921 128 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 RECQLP46063 649 aaPredicted RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 CCNHP51946 323 aaPredicted RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 CYP4V2Q6ZWL3 525 aaPredicted RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 PROSER1Q86XN7 944 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 PNPLA1Q8N8W4 532 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 ADAMTS14Q8WXS8 1223 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 SERAC1Q96JX3 654 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 EPAS1Q99814 870 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 HEPHQ9BQS7 1158 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 KDM4CQ9H3R0 1056 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 RETREG1Q9H6L5 497 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 HECAQ9UBI9 543 aaPredicted RBP12.92□□□□□ -0.34
HERC2-206ENST00000564519 PCOLCE2Q9UKZ9 415 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 AP4E1Q9UPM8 1137 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 BTBD3Q9Y2F9 522 aa12.92□□□□□ -0.34
HERC2-206ENST00000564519 ASCC3Q8N3C0 2202 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 A0A1W2PQU0 124 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 WASH4PA8MWX3 477 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 RASA4BC9J798 803 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 RASA4O43374 803 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 BUB1O43683 1085 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 RNGTTO60942 597 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 CD38P28907 300 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 MIPP30301 263 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 ETFBP38117 255 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 AIF1P55008 147 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 C21orf59P57076 290 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 ZBED6P86452 979 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 SUZ12Q15022 739 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 SHBQ15464 509 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 DBX2Q6ZNG2 339 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 PRPF39Q86UA1 669 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 TRIM69Q86WT6 500 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 ZNF354CQ86Y25 554 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 RYBPQ8N488 228 aaPredicted RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 FNIP1Q8TF40 1166 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 SYN2Q92777 582 aaPredicted RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 KLK6Q92876 244 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 MYOCQ99972 504 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
HERC2-206ENST00000564519 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 HDAC8Q9BY41 377 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 DHX35Q9H5Z1 703 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 ZDHHC6Q9H6R6 413 aa12.91□□□□□ -0.34
HERC2-206ENST00000564519 NYNRINQ9P2P1 1898 aaKnown RBP12.91□□□□□ -0.34
HERC2-206ENST00000564519 A0A087X0T9 212 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 EIF4E1BA6NMX2 242 aaKnown RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 EEF2KO00418 725 aaKnown RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 LRCH4O75427 683 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 TMCC1O94876 653 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 SERPING1P05155 500 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 FAM228BP0C875 321 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 TCF4P15884 667 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 PRLRP16471 622 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 IL1R2P27930 398 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 CASP14P31944 242 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 PI4KAP42356 2102 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 TPI1P60174 286 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 ATXN7L2Q5T6C5 722 aaPredicted RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 ERMARDQ5T6L9 678 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 SEL1L3Q68CR1 1132 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 NAPEPLDQ6IQ20 393 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 C19orf48Q6RUI8 117 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 PARS2Q7L3T8 475 aaKnown RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 UMODL1-AS1Q8N2C9 162 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 BAHD1Q8TBE0 780 aaPredicted RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
HERC2-206ENST00000564519 ISG20Q96AZ6 181 aaKnown RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 CELF6Q96J87 481 aaKnown RBP12.9□□□□□ -0.34
HERC2-206ENST00000564519 BTBD6Q96KE9 485 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms