RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 E7ENQ6 273 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 H3BM21 787 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
RNF40-205ENST00000563909 AQP9O43315 295 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 JMJD7P0C870 316 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 NME1P15531 152 aaKnown RBP16.31■□□□□ 0.2
RNF40-205ENST00000563909 RPIAP49247 311 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 POLE2P56282 527 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 FZD2Q14332 565 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 MIIPQ5JXC2 388 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 NUGGCQ68CJ6 796 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 NADSYN1Q6IA69 706 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 PTAR1Q7Z6K3 402 aaPredicted RBP16.31■□□□□ 0.2
RNF40-205ENST00000563909 LUZP1Q86V48 1076 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 DCP2Q8IU60 420 aaKnown RBP16.31■□□□□ 0.2
RNF40-205ENST00000563909 LMX1AQ8TE12 382 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 NAT6Q93015 286 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 FOXP3Q9BZS1 431 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 STRADBQ9C0K7 418 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 VPS16Q9H269 839 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 TAB2Q9NYJ8 693 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 PISDQ9UG56 409 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 RP1P56715 2156 aa16.31■□□□□ 0.2
RNF40-205ENST00000563909 NYNRINQ9P2P1 1898 aaKnown RBP16.31■□□□□ 0.2
RNF40-205ENST00000563909 A6NNZ2 444 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 C1QTNF3-AMACRE9PGA6 284 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 TULP2O00295 520 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 LUC7L3O95232 432 aaKnown RBP16.3■□□□□ 0.2
RNF40-205ENST00000563909 IGLV3-27P01718 113 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 COPB1P53618 953 aaKnown RBP16.3■□□□□ 0.2
RNF40-205ENST00000563909 NEK5Q6P3R8 708 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 GBP6Q6ZN66 633 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 HORMAD1Q86X24 394 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 ANKRD52Q8NB46 1076 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 SLC4A11Q8NBS3 891 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 FRS2Q8WU20 508 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 GLMNQ92990 594 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 DDX50Q9BQ39 737 aaKnown RBP16.3■□□□□ 0.2
RNF40-205ENST00000563909 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 KLF15Q9UIH9 416 aa16.3■□□□□ 0.2
RNF40-205ENST00000563909 PRAMEF33A0A0G2JMD5 474 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 TMX2-CTNND1H3BSU7 103 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 NTN3O00634 580 aaPredicted RBP16.29■□□□□ 0.2
RNF40-205ENST00000563909 TPP1O14773 563 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 PRAMEF10O60809 474 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 RAD23BP54727 409 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 ADIGQ0VDE8 80 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 EXOC3L4Q17RC7 722 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 ACCSLQ4AC99 568 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 PIP5KL1Q5T9C9 394 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 ARHGAP17Q68EM7 881 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 SLC35F3Q8IY50 421 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 LMO3Q8TAP4 145 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 FAM174AQ8TBP5 190 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 AZIN2Q96A70 460 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 BOCQ9BWV1 1114 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 LRRC4Q9HBW1 653 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 CISHQ9NSE2 258 aa16.29■□□□□ 0.2
RNF40-205ENST00000563909 IPO11Q9UI26 975 aaKnown RBP16.29■□□□□ 0.2
RNF40-205ENST00000563909 SPENQ96T58 3664 aaKnown RBP16.28■□□□□ 0.2
RNF40-205ENST00000563909 SPTY2D1-AS1A0A0U1RR47 76 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 AGRPO00253 132 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 PCDH8O95206 1070 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 JUNDP17535 347 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
RNF40-205ENST00000563909 RIPPLY3P57055 190 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 TBX4P57082 545 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 FILIP1LQ4L180 1135 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 DCAF6Q58WW2 860 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 MS4A13Q5J8X5 152 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 PARGQ86W56 976 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 ATCAYQ86WG3 371 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 TATDN2Q93075 761 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 PPP1R13BQ96KQ4 1090 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 BMFQ96LC9 184 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 FAM81BQ96LP2 452 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 GFM1Q96RP9 751 aaKnown RBP16.28■□□□□ 0.2
RNF40-205ENST00000563909 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 INTS2Q9H0H0 1204 aaKnown RBP16.28■□□□□ 0.2
RNF40-205ENST00000563909 NUCKS1Q9H1E3 243 aaKnown RBP16.28■□□□□ 0.2
RNF40-205ENST00000563909 ZNF71Q9NQZ8 489 aaPredicted RBP16.28■□□□□ 0.2
RNF40-205ENST00000563909 TMPRSS4Q9NRS4 437 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 TUBD1Q9UJT1 453 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 PADI4Q9UM07 663 aa16.28■□□□□ 0.2
RNF40-205ENST00000563909 POM121BA6NF01 834 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 LGALS16A8MUM7 142 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 MCF2LO15068 1137 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 SERPINC1P01008 464 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
RNF40-205ENST00000563909 LRMPQ12912 555 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 SEL1L3Q68CR1 1132 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 SLC12A9Q9BXP2 914 aa16.27■□□□□ 0.2
RNF40-205ENST00000563909 GPR27Q9NS67 375 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms