RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 LRP3O75074 770 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 LEFTY1O75610 366 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 ADH1BP00325 375 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 GSRP00390 522 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 IGHV4-34P06331 123 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 ZNF806P0C7X5 589 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 GKP32189 559 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 MPLP40238 635 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 SLC1A1P43005 524 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 NOP2P46087 812 aaKnown RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 RGRP47804 291 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 MARCKSL1P49006 195 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 CCNHP51946 323 aaPredicted RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 GEMIN4P57678 1058 aaKnown RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 TAS2R38P59533 333 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 CREB5Q02930 508 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 ZNF33AQ06730 810 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 CNTN1Q12860 1018 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 SLC10A2Q12908 348 aaPredicted RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 KRT81Q14533 505 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 PAFAH1B3Q15102 231 aaKnown RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 PDK2Q15119 407 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 CSRP2Q16527 193 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 TAZQ16635 292 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 MYLK3Q32MK0 819 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 POM121L1PQ3SYA9 428 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 TTC31Q49AM3 519 aaPredicted RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 ATXN7L2Q5T6C5 722 aaPredicted RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 PIP5KL1Q5T9C9 394 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 AGBL4Q5VU57 503 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 LYSMD4Q5XG99 296 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 C11orf63Q6NUN7 778 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 TMCO3Q6UWJ1 677 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 HDDC3Q8N4P3 179 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 LZTR1Q8N653 840 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 CADM4Q8NFZ8 388 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 C1orf216Q8TAB5 229 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 CASKIN2Q8WXE0 1202 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 DNASE2BQ8WZ79 361 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 HSPA12BQ96MM6 686 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 RNF157Q96PX1 679 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 ZNF670Q9BS34 389 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 TM6SF2Q9BZW4 377 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 BTBD1Q9H0C5 482 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 SGK2Q9HBY8 427 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 RXFP3Q9NSD7 469 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 SEMA4GQ9NTN9 838 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 DONSONQ9NYP3 566 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 HECAQ9UBI9 543 aaPredicted RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 TRIM10Q9UDY6 481 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 IL36AQ9UHA7 158 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 IPO11Q9UI26 975 aaKnown RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 PILRBQ9UKJ0 227 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 FZD4Q9ULV1 537 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 FARP1Q9Y4F1 1045 aaPredicted RBP8.69□□□□□ -1.02
UBR1-204ENST00000563239 THADAQ6YHU6 1953 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 NUP205Q92621 2012 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 NUMA1Q14980 2115 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 DCHS1Q96JQ0 3298 aa8.69□□□□□ -1.02
UBR1-204ENST00000563239 PTPRZ1P23471 2315 aaPredicted RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 ZNF487B1APH4 448 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 MUSKO15146 869 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 MAFKO60675 156 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 NDUFS2O75306 463 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 GJB3O75712 270 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 RNASEH2AO75792 299 aaKnown RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 SEMA4FO95754 770 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 MAOBP27338 520 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 DNA2P51530 1060 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 ADPRHP54922 357 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 GSDMDP57764 484 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 GBE1Q04446 702 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 IL10RBQ08334 325 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 SLC10A7Q0GE19 358 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 SF3A2Q15428 464 aaKnown RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 DCAF12L1Q5VU92 463 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 FAM46CQ5VWP2 391 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 TCEAL6Q6IPX3 200 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 MFSD7Q6UXD7 560 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.68□□□□□ -1.02
UBR1-204ENST00000563239 CYP2U1Q7Z449 544 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 DSG4Q86SJ6 1040 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 VSIG1Q86XK7 387 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 ZNF354CQ86Y25 554 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 SYT12Q8IV01 421 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 RHOT1Q8IXI2 618 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 KIAA2013Q8IYS2 634 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 PLD5Q8N7P1 536 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 OR2AP1Q8NGE2 309 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 OR6K2Q8NGY2 324 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 GANCQ8TET4 914 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 PIGKQ92643 395 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 KRT35Q92764 455 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 TCEAL3Q969E4 200 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 BIRC7Q96CA5 298 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 HEPHQ9BQS7 1158 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 CALN1Q9BXU9 219 aa8.68□□□□□ -1.02
UBR1-204ENST00000563239 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms