RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 SIN3BO75182 1162 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 ZNF189O75820 626 aaPredicted RBP12.96□□□□□ -0.33
CDH11-204ENST00000562712 HOXA6P31267 233 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 CASQ1P31415 396 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 CSNK1DP48730 415 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.33
CDH11-204ENST00000562712 SATB1Q01826 763 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 ELAVL3Q14576 367 aaKnown RBP12.96□□□□□ -0.33
CDH11-204ENST00000562712 LONRF2Q1L5Z9 754 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 SLC45A4Q5BKX6 768 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 CARD16Q5EG05 197 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 C22orf39Q6P5X5 142 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 ZC3H18Q86VM9 953 aaKnown RBP12.96□□□□□ -0.33
CDH11-204ENST00000562712 ZSCAN30Q86W11 494 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 BBS5Q8N3I7 341 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 ZNF366Q8N895 744 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 COG1Q8WTW3 980 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 HAUS1Q96CS2 278 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 FAM129BQ96TA1 746 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 IRF2BPLQ9H1B7 796 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 HAUS2Q9NVX0 235 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 POLR3BQ9NW08 1133 aaPredicted RBP12.96□□□□□ -0.33
CDH11-204ENST00000562712 SEPT3Q9UH03 358 aa12.96□□□□□ -0.33
CDH11-204ENST00000562712 MYO18AQ92614 2054 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 ATG2BQ96BY7 2078 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 BCLAF3A2AJT9 711 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 KIF2AO00139 706 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 FANCGO15287 622 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 ALOX15BO15296 676 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 LAMTOR5O43504 91 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 RNASEH1O60930 286 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 ALDH1A2O94788 518 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 GSRP00390 522 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 RBP3P10745 1247 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 VAV1P15498 845 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 MMP13P45452 471 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 RECQLP46063 649 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 COPAP53621 1224 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 RHOAP61586 193 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 IFI35P80217 286 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 CCNG2Q16589 344 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 MYLK3Q32MK0 819 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 Q6ZVU0 165 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 ADAT2Q7Z6V5 191 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 TSEN2Q8NCE0 465 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 OR2AP1Q8NGE2 309 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 SLC35B2Q8TB61 432 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 LRRN4Q8WUT4 740 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 MS4A14Q96JA4 679 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 C16orf45Q96MC5 204 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDH11-204ENST00000562712 IL12RB2Q99665 862 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 CINPQ9BW66 212 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 RSPH9Q9H1X1 276 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 TNKS2Q9H2K2 1166 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 MTG2Q9H4K7 406 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 PRMT8Q9NR22 394 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 HECAQ9UBI9 543 aaPredicted RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 FBXO4Q9UKT5 387 aa12.95□□□□□ -0.34
CDH11-204ENST00000562712 R3HDM2Q9Y2K5 976 aaKnown RBP12.95□□□□□ -0.34
CDH11-204ENST00000562712 PROB1E7EW31 1015 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 H7C0C1 242 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 K7ESF4 209 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 KCNK1O00180 336 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 ZNF185O15231 689 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 APBB3O95704 486 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 IGSF6O95976 241 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 JCHAINP01591 159 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 CES1P23141 567 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 NBL1P41271 181 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 ATP5OP48047 213 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 ZBTB16Q05516 673 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 RAD51Q06609 339 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 ZNF235Q14590 738 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 GRM3Q14832 879 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 ANGPT1Q15389 498 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 SIX1Q15475 284 aaPredicted RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 TEX44Q53QW1 395 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 HEATR6Q6AI08 1181 aaKnown RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 DRICH1Q6PGQ1 229 aaPredicted RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 DARS2Q6PI48 645 aaKnown RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 DPY19L3Q6ZPD9 716 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 DSG4Q86SJ6 1040 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 TMPRSS6Q8IU80 811 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 MAML2Q8IZL2 1156 aaPredicted RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 STK40Q8N2I9 435 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms