RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 RNF43Q68DV7 783 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CDHR3Q6ZTQ4 885 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 MARK2Q7KZI7 788 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 TMEM135Q86UB9 458 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 LRRC6Q86X45 466 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 PPM1NQ8N819 430 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 GATA6Q92908 595 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CCDC97Q96F63 343 aaPredicted RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 PAWRQ96IZ0 340 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 BTN2A3PQ96KV6 586 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 MAGEB18Q96M61 343 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 TMEM237Q96Q45 408 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CCDC28BQ9BUN5 200 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 HERC2P3Q9BVR0 1158 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CATSPERBQ9H7T0 1116 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 OLA1Q9NTK5 396 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 NMRK1Q9NWW6 199 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 PDP2Q9P2J9 529 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 RPL26L1Q9UNX3 145 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 MAD1L1Q9Y6D9 718 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 SLC12A8A0AV02 714 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF840PA6NDX5 716 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ARHGAP42A6NI28 874 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ERI2A8K979 691 aaKnown RBP10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TCP11X1B4DZS4 312 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 NVLO15381 856 aaKnown RBP10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TLR5O60602 858 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 LILRB3O75022 631 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 GJB5O95377 273 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TIMP1P01033 207 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 HLA-DQB2P05538 268 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SERPINB4P48594 390 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 COG7P83436 770 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 OCRLQ01968 901 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 C10orf120Q5SQS8 335 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 CERCAMQ5T4B2 595 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 CES3Q6UWW8 571 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 C16orf59Q7L2K0 433 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 MIB1Q86YT6 1006 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ATPAF2Q8N5M1 289 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 FAM13CQ8NE31 585 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SPATA22Q8NHS9 363 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 MYRFLQ96LU7 910 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 FCRL5Q96RD9 977 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 NUDCD1Q96RS6 583 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SMC6Q96SB8 1091 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 MCMBPQ9BTE3 642 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 GLOD4Q9HC38 313 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TXLNGQ9NUQ3 528 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SLC17A7Q9P2U7 560 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 HSFX1Q9UBD0 423 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 PSAT1Q9Y617 370 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 MAGEA13PA6NCF6 341 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TRIM49D1C9J1S8 452 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 H3BNC9 293 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 GOLGA8RI6L899 631 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TMCC1O94876 653 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 INHBAP08476 426 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SLC6A4P31645 630 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 NDST2P52849 883 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 MPP3Q13368 585 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 BMPR2Q13873 1038 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 MUM1Q2TAK8 710 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TTC39BQ5VTQ0 682 aaPredicted RBP10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 RAP1GAP2Q684P5 730 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ITPRIPL1Q6GPH6 555 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 FBXO46Q6PJ61 603 aaPredicted RBP10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TIFABQ6ZNK6 161 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TMEM150AQ86TG1 271 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 CIR1Q86X95 450 aaPredicted RBP10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TEX26Q8N6G2 289 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZNF461Q8TAF7 563 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 OVCA2Q8WZ82 227 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SLC35B4Q969S0 331 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 WBP2Q969T9 261 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 TADA1Q96BN2 335 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 HMCESQ96FZ2 354 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 RMDN2Q96LZ7 410 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 GBP5Q96PP8 586 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 FERMT1Q9BQL6 677 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 BEGAINQ9BUH8 593 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 ZYG11BQ9C0D3 744 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 C11orf49Q9H6J7 331 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 FGFR1OP2Q9NVK5 253 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 NKIRAS1Q9NYS0 192 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 UBP1Q9NZI7 540 aa10.39□□□□□ -0.75
TUBGCP4-202ENST00000561691 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 IQANK1A0A1B0GTG1 560 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 J3KR12 359 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 C2CD2LO14523 706 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 ATP5HO75947 161 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 MT-CYBP00156 380 aaPredicted RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 LMNAP02545 664 aaKnown RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 KLKB1P03952 638 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 HMBSP08397 361 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 SNRPAP09012 282 aaKnown RBP10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 CA4P22748 312 aa10.38□□□□□ -0.75
TUBGCP4-202ENST00000561691 ADRA1DP25100 572 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms