RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PCDHA13Q9Y5I0 950 aa10.31□□□□□ -0.76
HERC1-212ENST00000561348 LRRD1A4D1F6 860 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 METTL12A8MUP2 240 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 EIF3CLB5ME19 914 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 NEMP1O14524 444 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 LRP3O75074 770 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 PALMO75781 387 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 IGSF6O95976 241 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 PRNPP04156 253 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 CTSLP07711 333 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 TGM1P22735 817 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 NDST2P52849 883 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 SLC25A11Q02978 314 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 SERINC3Q13530 473 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 LLGL1Q15334 1064 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 DUOXA1Q1HG43 343 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 LRRC73Q5JTD7 316 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 SPDYCQ5MJ68 293 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 CFAP58Q5T655 872 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 KIAA0895LQ68EN5 471 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 FBXL19Q6PCT2 694 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 LAYNQ6UX15 382 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 ARHGAP36Q6ZRI8 547 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 CYP4V2Q6ZWL3 525 aaPredicted RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 USP30Q70CQ3 517 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 POLNQ7Z5Q5 900 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 TMTC1Q8IUR5 882 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 PSTKQ8IV42 348 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 TP53INP2Q8IXH6 220 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 UMODL1-AS1Q8N2C9 162 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 PCDH20Q8N6Y1 951 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 NIPA2Q8N8Q9 360 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 OR2I1PQ8NGU4 316 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 RFFLQ8WZ73 363 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 BIRC7Q96CA5 298 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 ZNF419Q96HQ0 510 aaPredicted RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 CSPG4P5Q96PW8 444 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 CINPQ9BW66 212 aaPredicted RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 MAK16Q9BXY0 300 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 ETNK2Q9NVF9 386 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 PPM1HQ9ULR3 514 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 NENFQ9UMX5 172 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 EPN1Q9Y6I3 576 aaPredicted RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 FRYLO94915 3013 aa10.3□□□□□ -0.76
HERC1-212ENST00000561348 NYNRINQ9P2P1 1898 aaKnown RBP10.3□□□□□ -0.76
HERC1-212ENST00000561348 ADAMTS9Q9P2N4 1935 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 LNP1A1A4G5 178 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ZSCAN5CA6NGD5 496 aaPredicted RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 C4orf47A7E2U8 309 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 PRR5-ARHGAP8B1AHC4 643 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 RNF103O00237 685 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 BCAT2O15382 392 aaPredicted RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 NEBLO76041 1014 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 NDUFA10O95299 355 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 KRT1P04264 644 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 UGT2B4P06133 528 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 KRT7P08729 469 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ENGP17813 658 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 XPAP23025 273 aaPredicted RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 HTR7P34969 479 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 CSNK1EP49674 416 aaKnown RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 ADPRHP54922 357 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ARHGAP8P85298 464 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 RAD51Q06609 339 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ITKQ08881 620 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 DPYSL2Q16555 572 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 PLA2G2CQ5R387 149 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 MAP7D3Q8IWC1 876 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 CCDC170Q8IYT3 715 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ATPAF2Q8N5M1 289 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 NPWQ8N729 165 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ACRBPQ8NEB7 543 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 CADM4Q8NFZ8 388 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 OR2AP1Q8NGE2 309 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 OR2T34Q8NGX1 318 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 CEP76Q8TAP6 659 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 NSMCE1Q8WV22 266 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 TEKT4Q8WW24 435 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ARRDC3Q96B67 414 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 RMDN1Q96DB5 314 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 PPP1R16AQ96I34 528 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 GDAP1L1Q96MZ0 367 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 KLHL32Q96NJ5 620 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 BAG1Q99933 345 aaPredicted RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 CEP44Q9C0F1 390 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 SUSD2Q9UGT4 822 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 IPO11Q9UI26 975 aaKnown RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 SLC6A14Q9UN76 642 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.29□□□□□ -0.76
HERC1-212ENST00000561348 TTLL3Q9Y4R7 772 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 GVINP1Q7Z2Y8 2422 aa10.29□□□□□ -0.76
HERC1-212ENST00000561348 A0A1B0GTW7 788 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms