RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ARHGAP36Q6ZRI8 547 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 LZTR1Q8N653 840 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 GANCQ8TET4 914 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 CASKIN2Q8WXE0 1202 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 CCDC114Q96M63 670 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 OMDQ99983 421 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 HEPHQ9BQS7 1158 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 TM6SF2Q9BZW4 377 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 CAPN10Q9HC96 672 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 HECAQ9UBI9 543 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 SALL4Q9UJQ4 1053 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 SLCO1B1Q9Y6L6 691 aa15.54■□□□□ 0.08
SNRPA1-213ENST00000560856 ARHGAP42A6NI28 874 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 C1QTNF3-AMACRE9PGA6 284 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 FOXD2O60548 495 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 LEFTY1O75610 366 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 PRNPP04156 253 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 GKP32189 559 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 DPP6P42658 865 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 SSR1P43307 286 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 DNA2P51530 1060 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 TAS2R38P59533 333 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 LMNB2Q03252 620 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 WDR45BQ5MNZ6 344 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 SYCP2LQ5T4T6 812 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 ATXN7L2Q5T6C5 722 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 PIP5KL1Q5T9C9 394 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 SLC23A3Q6PIS1 610 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 NCEH1Q6PIU2 408 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 SPC24Q8NBT2 197 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 OR2AP1Q8NGE2 309 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 OR2T34Q8NGX1 318 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 PCDH19Q8TAB3 1148 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 RAPGEF5Q92565 580 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 BIRC7Q96CA5 298 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 FAF2Q96CS3 445 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 EBF2Q9HAK2 575 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 LHX3Q9UBR4 397 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 IL36AQ9UHA7 158 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 DCHS1Q96JQ0 3298 aa15.53■□□□□ 0.08
SNRPA1-213ENST00000560856 A0A0A6YYK5 440 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 LNP1A1A4G5 178 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 C3orf70A6NLC5 250 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 PRR5-ARHGAP8B1AHC4 643 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 KHNYNO15037 678 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 SLC7A4O43246 635 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 PLRG1O43660 514 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 PEX11BO96011 259 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 KRT7P08729 469 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 GJC1P36383 396 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 RECQLP46063 649 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 ARHGAP8P85298 464 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 KRT81Q14533 505 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 PDK2Q15119 407 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 SPA17Q15506 151 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 DUOXA1Q1HG43 343 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 MYLK3Q32MK0 819 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 TRIM61Q5EBN2 209 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 LRRC38Q5VT99 294 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 KIAA0895LQ68EN5 471 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 TMCO3Q6UWJ1 677 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 ZNF354CQ86Y25 554 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 RGL4Q8IZJ4 473 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 PQLC3Q8N755 202 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 OR14C36Q8NHC7 312 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 GRIN3AQ8TCU5 1115 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 RMDN1Q96DB5 314 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 ZNF670Q9BS34 389 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 HDAC8Q9BY41 377 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 KLHL11Q9NVR0 708 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 DLL3Q9NYJ7 618 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 UBA2Q9UBT2 640 aaPredicted RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 EIF2B4Q9UI10 523 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 IPO11Q9UI26 975 aaKnown RBP15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 HYOU1Q9Y4L1 999 aa15.52■□□□□ 0.08
SNRPA1-213ENST00000560856 MEI4A8MW99 385 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 DFFAO00273 331 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 KPNA3O00505 521 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 BUB1BO60566 1050 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 POP4O95707 220 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 SERPINF2P08697 491 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 KDELR1P24390 212 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 SNRPD1P62314 119 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 IL10RBQ08334 325 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 PAFAH1B3Q15102 231 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 ANKRD20A8PQ5CZ79 823 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 C12orf50Q8NA57 414 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 KCTD6Q8NC69 237 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 ACRBPQ8NEB7 543 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 OR6K2Q8NGY2 324 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 CEP76Q8TAP6 659 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 BAG1Q99933 345 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 LACRTQ9GZZ8 138 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 KDM4CQ9H3R0 1056 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 GOLPH3Q9H4A6 298 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 FSCN3Q9NQT6 498 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC6A14Q9UN76 642 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms