RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 FOXJ1Q92949 421 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 ISG20Q96AZ6 181 aaKnown RBP12.3□□□□□ -0.44
USP8-212ENST00000560730 PDFQ9HBH1 243 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 FSCN3Q9NQT6 498 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 HECAQ9UBI9 543 aaPredicted RBP12.3□□□□□ -0.44
USP8-212ENST00000560730 EIF2B4Q9UI10 523 aaKnown RBP12.3□□□□□ -0.44
USP8-212ENST00000560730 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 REXO2Q9Y3B8 237 aaKnown RBP12.3□□□□□ -0.44
USP8-212ENST00000560730 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
USP8-212ENST00000560730 DMXL1Q9Y485 3027 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 PCDH15Q96QU1 1955 aa12.3□□□□□ -0.44
USP8-212ENST00000560730 ZSCAN5CA6NGD5 496 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 ARHGAP42A6NI28 874 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 C10orf142B7Z368 130 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 C1QTNF3-AMACRE9PGA6 284 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 DFFAO00273 331 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 FSBPO95073 299 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 IGHV4-34P06331 123 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 CYLC1P35663 651 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 RECQLP46063 649 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 ADPRHP54922 357 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 GEMIN4P57678 1058 aaKnown RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 DPYSL3Q14195 570 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 SPA17Q15506 151 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 AASDHQ4L235 1098 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 INO80DQ53TQ3 878 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 TRIM61Q5EBN2 209 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 SYCP2LQ5T4T6 812 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 AGBL4Q5VU57 503 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 FAM46CQ5VWP2 391 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 OR14C36Q8NHC7 312 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 C1orf216Q8TAB5 229 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 SNX19Q92543 992 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 RAPGEF5Q92565 580 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 FAM131CQ96AQ9 280 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 BIRC7Q96CA5 298 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 PCED1AQ9H1Q7 454 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 ZDHHC6Q9H6R6 413 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 DONSONQ9NYP3 566 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 IMPACTQ9P2X3 320 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 IL36AQ9UHA7 158 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 LCMT1Q9UIC8 334 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 CABIN1Q9Y6J0 2220 aa12.29□□□□□ -0.44
USP8-212ENST00000560730 CNOT1A5YKK6 2376 aaKnown RBP12.29□□□□□ -0.44
USP8-212ENST00000560730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 LNP1A1A4G5 178 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 GSRP00390 522 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 PRNPP04156 253 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 CFIP05156 583 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 COMTP21964 271 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 TAS2R38P59533 333 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 LMNB2Q03252 620 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 DUOXA1Q1HG43 343 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 RSPO4Q2I0M5 234 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 MYLK3Q32MK0 819 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 WDR45BQ5MNZ6 344 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 PIP5KL1Q5T9C9 394 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 KIAA0895LQ68EN5 471 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 TMCO3Q6UWJ1 677 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 LZTR1Q8N653 840 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 C12orf50Q8NA57 414 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 KCTD6Q8NC69 237 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 ACRBPQ8NEB7 543 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 OR2AP1Q8NGE2 309 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 OR2T34Q8NGX1 318 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 PCDH19Q8TAB3 1148 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 BAG1Q99933 345 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 ORAI3Q9BRQ5 295 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 CALN1Q9BXU9 219 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 MIR1-1HGQ9H1L0 117 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 EBF2Q9HAK2 575 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 UBA2Q9UBT2 640 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 EVLQ9UI08 416 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 IPO11Q9UI26 975 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 DUSP10Q9Y6W6 482 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 TP53BP1Q12888 1972 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 TMEM131Q92545 1883 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 LAMA1P25391 3075 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 KRIT1O00522 736 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 INSIG1O15503 277 aa12.28□□□□□ -0.44
USP8-212ENST00000560730 PLRG1O43660 514 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 POP4O95707 220 aaKnown RBP12.28□□□□□ -0.44
USP8-212ENST00000560730 KRT7P08729 469 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms