RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PPIDQ08752 370 aaKnown RBP16.85■□□□□ 0.29
TPM1-219ENST00000559397 PLEKHG6Q3KR16 790 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 FUT11Q495W5 492 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 TMEM215Q68D42 235 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 ADIPOR2Q86V24 386 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 OR2W6PQ8NHA6 318 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 HDAC11Q96DB2 347 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 MSANTD3Q96H12 275 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 SPATA13Q96N96 652 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 TMEM109Q9BVC6 243 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 MUC3BQ9H195 1237 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 RAB6BQ9NRW1 208 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 NINJ2Q9NZG7 142 aa16.85■□□□□ 0.29
TPM1-219ENST00000559397 MUC3AQ02505 3323 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 E7ESA3 106 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 EIF3HO15372 352 aaKnown RBP eCLIP16.84■□□□□ 0.29
TPM1-219ENST00000559397 RNF40O75150 1001 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 MAGEA4P43358 317 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 PAPOLAP51003 745 aaKnown RBP16.84■□□□□ 0.29
TPM1-219ENST00000559397 BASP1P80723 227 aaKnown RBP16.84■□□□□ 0.29
TPM1-219ENST00000559397 KDSRQ06136 332 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 ZNF33AQ06730 810 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 WASHC5Q12768 1159 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 DMC1Q14565 340 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 MLF2Q15773 248 aaPredicted RBP16.84■□□□□ 0.29
TPM1-219ENST00000559397 PITRM1Q5JRX3 1037 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 CEP85LQ5SZL2 805 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 ARHGAP36Q6ZRI8 547 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 TERB1Q8NA31 727 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 P2RY13Q9BPV8 354 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 TMBIM4Q9HC24 238 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 WNT16Q9UBV4 365 aa16.84■□□□□ 0.29
TPM1-219ENST00000559397 ARHGAP42A6NI28 874 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 PRRT4C9JH25 899 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 DFFAO00273 331 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 OPHN1O60890 802 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ZMPSTE24O75844 475 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 METTL18O95568 372 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 SHBGP04278 402 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ETFBP38117 255 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 GARSP41250 739 aaKnown RBP16.83■□□□□ 0.28
TPM1-219ENST00000559397 GRIA2P42262 883 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 NUMBP49757 651 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 AP1B1Q10567 949 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 SERINC3Q13530 473 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 HIF1AQ16665 826 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 KYNUQ16719 465 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ANKRD20A2Q5SQ80 823 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ANKRD20A1Q5TYW2 823 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ANKRD20A3Q5VUR7 823 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 TPRG1Q6ZUI0 275 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 CENPUQ71F23 418 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 SFTPA1Q8IWL2 248 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 SUGP1Q8IWZ8 645 aaKnown RBP16.83■□□□□ 0.28
TPM1-219ENST00000559397 GOLGA6L1Q8N7Z2 621 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 WFIKKN2Q8TEU8 576 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 TTC17Q96AE7 1141 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 FERMT1Q9BQL6 677 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ETNK1Q9HBU6 452 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 ATP13A1Q9HD20 1204 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 SAYSD1Q9NPB0 183 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 VPS28Q9UK41 221 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 CA14Q9ULX7 337 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 F5P12259 2224 aa16.83■□□□□ 0.28
TPM1-219ENST00000559397 KRBA1A5PL33 1030 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 RNF103O00237 685 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 MTSS1O43312 755 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 KDELR3O43731 214 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 MAFKO60675 156 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 STK10O94804 968 aaKnown RBP16.82■□□□□ 0.28
TPM1-219ENST00000559397 KAT7O95251 611 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 GLDCP23378 1020 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 ARL4CP56559 192 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 ARF5P84085 180 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 SEMA5AQ13591 1074 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 PREPLQ4J6C6 727 aaPredicted RBP16.82■□□□□ 0.28
TPM1-219ENST00000559397 TTMPQ5BVD1 217 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 TMEM196Q5HYL7 178 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 IL31Q6EBC2 164 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 TAB3Q8N5C8 712 aaPredicted RBP16.82■□□□□ 0.28
TPM1-219ENST00000559397 DCAF4L2Q8NA75 395 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 CCNYQ8ND76 341 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 MCUQ8NE86 351 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 EZH1Q92800 747 aaPredicted RBP16.82■□□□□ 0.28
TPM1-219ENST00000559397 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 UHRF1Q96T88 793 aaPredicted RBP16.82■□□□□ 0.28
TPM1-219ENST00000559397 SPON2Q9BUD6 331 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
TPM1-219ENST00000559397 ARHGEF3Q9NR81 526 aa16.82■□□□□ 0.28
TPM1-219ENST00000559397 SNAP91O60641 907 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 APODP05090 189 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 ABHD2P08910 425 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 TPSB2P20231 275 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 FDFT1P37268 417 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 PRKCQQ04759 706 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 PON2Q15165 354 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 TPSAB1Q15661 275 aa16.81■□□□□ 0.28
TPM1-219ENST00000559397 FNBP1LQ5T0N5 605 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms