RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 UBA2Q9UBT2 640 aaPredicted RBP11.63□□□□□ -0.55
SNX1-204ENST00000559061 LRRK1Q38SD2 2015 aa11.63□□□□□ -0.55
SNX1-204ENST00000559061 PCDH15Q96QU1 1955 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 A0A1W2PP55 124 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 TCRBV7S2A1N4TA0A589 114 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PRR23AA6NEV1 266 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 ZSCAN5CA6NGD5 496 aaPredicted RBP11.62□□□□□ -0.55
SNX1-204ENST00000559061 FANCGO15287 622 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 ALOX15BO15296 676 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 BNIP3LO60238 219 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 LEFTY1O75610 366 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 GSRP00390 522 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 CHRNA3P32297 505 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 ACSL1P33121 698 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PTPN7P35236 360 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
SNX1-204ENST00000559061 DYNLT1P63172 113 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 ZNF211Q13398 564 aaPredicted RBP11.62□□□□□ -0.55
SNX1-204ENST00000559061 E2F5Q15329 346 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PPP2R5EQ16537 467 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PIP5KL1Q5T9C9 394 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 AGBL4Q5VU57 503 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 ZSWIM9Q86XI8 627 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PLPP6Q8IY26 295 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 TEX26Q8N6G2 289 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 OR2AP1Q8NGE2 309 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PIP4K2CQ8TBX8 421 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 GRIN3AQ8TCU5 1115 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 PRCCQ92733 491 aaPredicted RBP11.62□□□□□ -0.55
SNX1-204ENST00000559061 HDAC11Q96DB2 347 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 TSGA13Q96PP4 275 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 LGMNQ99538 433 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 ORAI3Q9BRQ5 295 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 TSGA10Q9BZW7 698 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 WSB2Q9NYS7 404 aaPredicted RBP11.62□□□□□ -0.55
SNX1-204ENST00000559061 SMG5Q9UPR3 1016 aaKnown RBP11.62□□□□□ -0.55
SNX1-204ENST00000559061 SDK1Q7Z5N4 2213 aa11.62□□□□□ -0.55
SNX1-204ENST00000559061 CCDC66A2RUB6 948 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 APOL1O14791 398 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 CST8O60676 142 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 TGM1P22735 817 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 SLC8A1P32418 973 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 CNR2P34972 360 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 SERPINB6P35237 376 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 NNMTP40261 264 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 PTGER3P43115 390 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 ZBTB16Q05516 673 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 PPIDQ08752 370 aaKnown RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 CNTN1Q12860 1018 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 ZBTB17Q13105 803 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 SIM2Q14190 667 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 PRKD1Q15139 912 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 TFDP3Q5H9I0 405 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 TMCO4Q5TGY1 634 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 MEI1Q5TIA1 1274 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 KAZNQ674X7 775 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 BBS12Q6ZW61 710 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 PARS2Q7L3T8 475 aaKnown RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 PEX26Q7Z412 305 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 FAM124AQ86V42 546 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 ZNF354CQ86Y25 554 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 RFX6Q8HWS3 928 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 MAP7D3Q8IWC1 876 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 RCOR2Q8IZ40 523 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 ATPAF2Q8N5M1 289 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 DEFB119Q8N690 84 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 CNTD1Q8N815 330 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 CASKIN2Q8WXE0 1202 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 OR8D1Q8WZ84 308 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 FATE1Q969F0 183 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 TOE1Q96GM8 510 aaKnown RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 PSKH2Q96QS6 385 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 MGME1Q9BQP7 344 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 HEMGNQ9BXL5 484 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 TLR10Q9BXR5 811 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 NEUROG2Q9H2A3 272 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 C6orf106Q9H6K1 298 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 SP110Q9HB58 689 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 HECAQ9UBI9 543 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 IL36AQ9UHA7 158 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 EVLQ9UI08 416 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 AMFRQ9UKV5 643 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
SNX1-204ENST00000559061 TP53BP1Q12888 1972 aaPredicted RBP11.61□□□□□ -0.55
SNX1-204ENST00000559061 LAMA1P25391 3075 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 KRT86O43790 486 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 ZRANB2O95218 330 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNX1-204ENST00000559061 PIGNO95427 931 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 IL1BP01584 269 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 HLA-DQB2P05538 268 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 C5AR1P21730 350 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 CD6P30203 668 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 ABL2P42684 1182 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 ADPRHP54922 357 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 RWDD2BP57060 319 aa11.6□□□□□ -0.55
SNX1-204ENST00000559061 GEMIN4P57678 1058 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms