RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 TRIM61Q5EBN2 209 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 CARD16Q5EG05 197 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 PSTKQ8IV42 348 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 C12orf50Q8NA57 414 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 TEKT4Q8WW24 435 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 FAF2Q96CS3 445 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 EXOC2Q96KP1 924 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 PPP1R9BQ96SB3 815 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 EPAS1Q99814 870 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 CTTNBP2NLQ9P2B4 639 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 EVLQ9UI08 416 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 CA5BQ9Y2D0 317 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 ASPMQ8IZT6 3477 aa12.87□□□□□ -0.35
RABGGTA-207ENST00000558936 CABIN1Q9Y6J0 2220 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 CXorf51AA0A1B0GTR3 108 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 MYO1FO00160 1098 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC30A4O14863 429 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 LATO43561 262 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 PLRG1O43660 514 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 MAFKO60675 156 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 RNASEH2AO75792 299 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 MAP3K6O95382 1288 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 MARCKSL1P49006 195 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 CLCN6P51797 869 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 NDST2P52849 883 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 LIMK1P53667 647 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 YBEYP58557 167 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC10A7Q0GE19 358 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 BOLA3Q53S33 107 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 NCBP2-AS2Q69YL0 99 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 ZCCHC9Q8N567 271 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 GRIN3AQ8TCU5 1115 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 ISG20Q96AZ6 181 aaKnown RBP12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 CCDC42Q96M95 316 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 BTBD1Q9H0C5 482 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 FZD4Q9ULV1 537 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 ARID1BQ8NFD5 2236 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
RABGGTA-207ENST00000558936 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 A0A1W2PR77 199 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 KCNK3O14649 394 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 KHNYNO15037 678 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 ALOX15BO15296 676 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 BUB1O43683 1085 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 MFSD11O43934 449 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 ENGP17813 658 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 SDHBP21912 280 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 HOXD12P35452 270 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 NNMTP40261 264 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 DPP6P42658 865 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 MESDQ14696 234 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 PTPRRQ15256 657 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 SHBQ15464 509 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 PARP15Q460N3 678 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 STPG1Q5TH74 334 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 KIAA0895LQ68EN5 471 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 PARS2Q7L3T8 475 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 PCDH20Q8N6Y1 951 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 TSEN2Q8NCE0 465 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 OR8D1Q8WZ84 308 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 FOXJ1Q92949 421 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 SLC6A18Q96N87 628 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 PANX2Q96RD6 677 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 RTKNQ9BST9 563 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 SGK2Q9HBY8 427 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 TM9SF3Q9HD45 589 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 HECAQ9UBI9 543 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 CDV3Q9UKY7 258 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 ITM2BQ9Y287 266 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 PCDHA13Q9Y5I0 950 aa12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-207ENST00000558936 FAM47DPA6NHR8 397 aa12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 EIF3CLB5ME19 914 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 GIPC1O14908 333 aa12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 RAD51BO15315 384 aa12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 RNASEH1O60930 286 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 FSBPO95073 299 aa12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 PIGNO95427 931 aa12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 ADH1BP00325 375 aa12.84□□□□□ -0.35
RABGGTA-207ENST00000558936 GSRP00390 522 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms