RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 RFTN1Q14699 578 aaPredicted RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 CARD16Q5EG05 197 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 ZNF776Q68DI1 518 aaPredicted RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 DPY19L3Q6ZPD9 716 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 BZW1Q7L1Q6 419 aaKnown RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 MMAAQ8IVH4 418 aaKnown RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 CCDC13Q8IYE1 715 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 OR2AP1Q8NGE2 309 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 OR6K2Q8NGY2 324 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 SIPA1Q96FS4 1042 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 TSGA13Q96PP4 275 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 FAM129BQ96TA1 746 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 FAM118BQ9BPY3 351 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 RSPH9Q9H1X1 276 aaPredicted RBP17.73■□□□□ 0.43
TPM1-214ENST00000558544 EBF1Q9UH73 591 aa17.73■□□□□ 0.43
TPM1-214ENST00000558544 TCRBV7S2A1N4TA0A589 114 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 H0Y858 1186 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 MCF2LO15068 1137 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 MATN3O15232 486 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 RNASEH1O60930 286 aaKnown RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 IGSF6O95976 241 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 CTSLP07711 333 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 HOXA6P31267 233 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 PSMD8P48556 350 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 OTUD4Q01804 1114 aaKnown RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 KLF1Q13351 362 aaPredicted RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 NOMO1Q15155 1222 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 ZNF528Q3MIS6 628 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 ZC3H18Q86VM9 953 aaKnown RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 ZSCAN30Q86W11 494 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 TSEN2Q8NCE0 465 aaKnown RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 ACTL9Q8TC94 416 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 GRIN3AQ8TCU5 1115 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 PRCCQ92733 491 aaPredicted RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 ZNF419Q96HQ0 510 aaPredicted RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 GDAP1L1Q96MZ0 367 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 PRRX2Q99811 253 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 ZDHHC6Q9H6R6 413 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 CD93Q9NPY3 652 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 HECAQ9UBI9 543 aaPredicted RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 SEPT3Q9UH03 358 aa17.72■□□□□ 0.43
TPM1-214ENST00000558544 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
TPM1-214ENST00000558544 MYO15AQ9UKN7 3530 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 MUSKO15146 869 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 ALOX15BO15296 676 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 IL1BP01584 269 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 DNTTP04053 509 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 GKP32189 559 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 CHRNA3P32297 505 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 MMP13P45452 471 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 RGRP47804 291 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 NRLP54845 237 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 TCF15Q12870 199 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 MARC1Q5VT66 337 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 ADAT2Q7Z6V5 191 aaKnown RBP17.71■□□□□ 0.43
TPM1-214ENST00000558544 DSG4Q86SJ6 1040 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 WDR5BQ86VZ2 330 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 LONP2Q86WA8 852 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 SLC13A5Q86YT5 568 aaPredicted RBP17.71■□□□□ 0.43
TPM1-214ENST00000558544 TFB1MQ8WVM0 346 aaKnown RBP17.71■□□□□ 0.43
TPM1-214ENST00000558544 MAML1Q92585 1016 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 WDR24Q96S15 920 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 SEPT10Q9P0V9 454 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 IL36AQ9UHA7 158 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 EVLQ9UI08 416 aaPredicted RBP17.71■□□□□ 0.43
TPM1-214ENST00000558544 SARDHQ9UL12 918 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 SPAG17Q6Q759 2223 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 NUMA1Q14980 2115 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 VPS13AQ96RL7 3174 aa17.71■□□□□ 0.43
TPM1-214ENST00000558544 CCDC163A0A0D9SF12 145 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 KCNK1O00180 336 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 RNF103O00237 685 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 KRIT1O00522 736 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 MID1O15344 667 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 CEP104O60308 925 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 ACADMP11310 421 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 CCNB1P14635 433 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 ZNF33AQ06730 810 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 HNRNPDQ14103 355 aaKnown RBP17.7■□□□□ 0.42
TPM1-214ENST00000558544 PRKD1Q15139 912 aaPredicted RBP17.7■□□□□ 0.42
TPM1-214ENST00000558544 CST6Q15828 149 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 POM121L1PQ3SYA9 428 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 FAM182AQ5T1J6 154 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 PLPP6Q8IY26 295 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 BBS5Q8N3I7 341 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 PGBD5Q8N414 524 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 PIP4K2CQ8TBX8 421 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 NELL1Q92832 810 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 FATE1Q969F0 183 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 QKIQ96PU8 341 aaKnown RBP eCLIP17.7■□□□□ 0.421e-8■■■■■ 42
TPM1-214ENST00000558544 PSKH2Q96QS6 385 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 HEPHQ9BQS7 1158 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 FAM126AQ9BYI3 521 aaPredicted RBP17.7■□□□□ 0.42
TPM1-214ENST00000558544 CEP41Q9BYV8 373 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 BRD8Q9H0E9 1235 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 NT5MQ9NPB1 228 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 ZSCAN32Q9NX65 697 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 WASF2Q9Y6W5 498 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 THADAQ6YHU6 1953 aa17.7■□□□□ 0.42
TPM1-214ENST00000558544 TTC24A2A3L6 582 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms