RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CCNHP51946 323 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 ZNF211Q13398 564 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 LBRQ14739 615 aaKnown RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 RPS6KA1Q15418 735 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 ATXN7L2Q5T6C5 722 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 CCNYQ8ND76 341 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 NSMCE1Q8WV22 266 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 SPACA7Q96KW9 195 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 CINPQ9BW66 212 aaPredicted RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 OSBPL8Q9BZF1 889 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 CD93Q9NPY3 652 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 USP36Q9P275 1121 aaKnown RBP25.97■■□□□ 1.75
SMAD6-202ENST00000557916 LHX3Q9UBR4 397 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 SARDHQ9UL12 918 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 SCML1Q9UN30 329 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 EFR3BQ9Y2G0 817 aa25.97■■□□□ 1.75
SMAD6-202ENST00000557916 MID1O15344 667 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 PEX11BO96011 259 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 ADH1BP00325 375 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 CCNCP24863 283 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 NR2C2P49116 596 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 SLC10A7Q0GE19 358 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 TTC31Q49AM3 519 aaPredicted RBP25.96■■□□□ 1.75
SMAD6-202ENST00000557916 FAM46CQ5VWP2 391 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 AADACL2Q6P093 401 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 BBS12Q6ZW61 710 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 FAM160A2Q8N612 972 aaPredicted RBP25.96■■□□□ 1.75
SMAD6-202ENST00000557916 FRMD1Q8N878 549 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 GDAP1L1Q96MZ0 367 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 TSGA13Q96PP4 275 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 HEPHQ9BQS7 1158 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 PABPC3Q9H361 631 aaKnown RBP25.96■■□□□ 1.75
SMAD6-202ENST00000557916 SEPT3Q9UH03 358 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 IL36AQ9UHA7 158 aa25.96■■□□□ 1.75
SMAD6-202ENST00000557916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.96■■□□□ 1.754e-6■■■■■ 27.3
SMAD6-202ENST00000557916 IGSF6O95976 241 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 CTSLP07711 333 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 C5AR1P21730 350 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 PDK1Q15118 436 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 MYLK3Q32MK0 819 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 TIGD7Q6NT04 549 aaPredicted RBP25.95■■□□□ 1.74
SMAD6-202ENST00000557916 CEP68Q76N32 757 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 BZW1Q7L1Q6 419 aaKnown RBP25.95■■□□□ 1.74
SMAD6-202ENST00000557916 TMIEQ8NEW7 156 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 OR6K2Q8NGY2 324 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 PIP4K2CQ8TBX8 421 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 LRRN4Q8WUT4 740 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 HDAC11Q96DB2 347 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 EXOC2Q96KP1 924 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 OLFM3Q96PB7 478 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 HERPUD2Q9BSE4 406 aa25.95■■□□□ 1.74
SMAD6-202ENST00000557916 SAE1Q9UBE0 346 aaPredicted RBP25.95■■□□□ 1.74
SMAD6-202ENST00000557916 C1QTNF3-AMACRE9PGA6 284 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 POP4O95707 220 aaKnown RBP25.94■■□□□ 1.74
SMAD6-202ENST00000557916 PRNPP04156 253 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 NBL1P41271 181 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 SIM2Q14190 667 aaPredicted RBP25.94■■□□□ 1.74
SMAD6-202ENST00000557916 ARSIQ5FYB1 569 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 CCDC181Q5TID7 509 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 MARC1Q5VT66 337 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 DCAF12L1Q5VU92 463 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 TSEN2Q8NCE0 465 aaKnown RBP25.94■■□□□ 1.74
SMAD6-202ENST00000557916 GRIN3AQ8TCU5 1115 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 GANCQ8TET4 914 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 P3H4Q92791 437 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 LGMNQ99538 433 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 ZDHHC6Q9H6R6 413 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 WASF2Q9Y6W5 498 aa25.94■■□□□ 1.74
SMAD6-202ENST00000557916 IGHV1OR15-9A0A0B4J2B8 117 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 KRIT1O00522 736 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 PPP1R12AO14974 1030 aaPredicted RBP25.93■■□□□ 1.74
SMAD6-202ENST00000557916 MATN3O15232 486 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 LEFTY1O75610 366 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 PECAM1P16284 738 aaPredicted RBP25.93■■□□□ 1.74
SMAD6-202ENST00000557916 RENBPP51606 427 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 PPIDQ08752 370 aaKnown RBP25.93■■□□□ 1.74
SMAD6-202ENST00000557916 SFSWAPQ12872 951 aaKnown RBP25.93■■□□□ 1.74
SMAD6-202ENST00000557916 ZNF235Q14590 738 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 C11orf74Q86VG3 221 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 CCDC13Q8IYE1 715 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 BBS5Q8N3I7 341 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 HAUS1Q96CS2 278 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 PSKH2Q96QS6 385 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 FBXL12Q9NXK8 326 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 MBD1Q9UIS9 605 aaPredicted RBP25.93■■□□□ 1.74
SMAD6-202ENST00000557916 NCKAP1Q9Y2A7 1128 aa25.93■■□□□ 1.74
SMAD6-202ENST00000557916 EML5Q05BV3 1969 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 USP27XA6NNY8 438 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 KPNA3O00505 521 aaPredicted RBP25.92■■□□□ 1.74
SMAD6-202ENST00000557916 MAP3K13O43283 966 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 IGLV3-19P01714 112 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 OXTRP30559 389 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 GKP32189 559 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 MMP13P45452 471 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 METAP1P53582 386 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 NHLH1Q02575 133 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 RAD51Q06609 339 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 HNRNPDQ14103 355 aaKnown RBP25.92■■□□□ 1.74
SMAD6-202ENST00000557916 POM121L1PQ3SYA9 428 aa25.92■■□□□ 1.74
SMAD6-202ENST00000557916 PRR23BQ6ZRT6 265 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms